RNA–Protein interactions for RNA: ENST00000428744.1

KIF3A-204, Transcript of kinesin family member 3A, humanhuman

TSL 5

Gene KIF3A, Length 658 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-204ENST00000428744 FAT2Q9NYQ8 4349 aa1.35□□□□□ -2.19
KIF3A-204ENST00000428744 KRTAP8-1Q8IUC2 63 aa1.35□□□□□ -2.19
KIF3A-204ENST00000428744 DYNC1H1Q14204 4646 aaKnown RBP1.35□□□□□ -2.19
KIF3A-204ENST00000428744 DNAH10Q8IVF4 4471 aa1.34□□□□□ -2.19
KIF3A-204ENST00000428744 KRTAP20-1Q3LI63 56 aa1.34□□□□□ -2.19
KIF3A-204ENST00000428744 HUWE1Q7Z6Z7 4374 aaKnown RBP1.34□□□□□ -2.2
KIF3A-204ENST00000428744 DNAH7Q8WXX0 4024 aa1.33□□□□□ -2.2
KIF3A-204ENST00000428744 MACF1Q9UPN3 7388 aaKnown RBP1.33□□□□□ -2.2
KIF3A-204ENST00000428744 PLECQ15149 4684 aaKnown RBP1.32□□□□□ -2.2
KIF3A-204ENST00000428744 FAT3Q8TDW7 4589 aa1.32□□□□□ -2.2
KIF3A-204ENST00000428744 KRTAP2-3P0C7H8 128 aa1.31□□□□□ -2.2
KIF3A-204ENST00000428744 KRTAP2-4Q9BYR9 128 aa1.31□□□□□ -2.2
KIF3A-204ENST00000428744 KRTAP2-1Q9BYU5 128 aa1.31□□□□□ -2.2
KIF3A-204ENST00000428744 FCGBPQ9Y6R7 5405 aaPredicted RBP1.31□□□□□ -2.2
KIF3A-204ENST00000428744 LRP2P98164 4655 aa1.31□□□□□ -2.2
KIF3A-204ENST00000428744 DNAH8Q96JB1 4490 aa1.3□□□□□ -2.2
KIF3A-204ENST00000428744 M0R2T5 61 aa1.3□□□□□ -2.2
KIF3A-204ENST00000428744 FAT1Q14517 4588 aa1.28□□□□□ -2.2
KIF3A-204ENST00000428744 STARD9Q9P2P6 4700 aa1.28□□□□□ -2.21
KIF3A-204ENST00000428744 PKHD1L1Q86WI1 4243 aa1.27□□□□□ -2.21
KIF3A-204ENST00000428744 DNAH17Q9UFH2 4485 aa1.26□□□□□ -2.21
KIF3A-204ENST00000428744 DNAH3Q8TD57 4116 aa1.25□□□□□ -2.21
KIF3A-204ENST00000428744 LRP1BQ9NZR2 4599 aa1.25□□□□□ -2.21
KIF3A-204ENST00000428744 APOBP04114 4563 aaKnown RBP1.25□□□□□ -2.21
KIF3A-204ENST00000428744 KRTAP10-4P60372 401 aaPredicted RBP1.24□□□□□ -2.21
KIF3A-204ENST00000428744 DNAH6Q9C0G6 4158 aa1.24□□□□□ -2.21
KIF3A-204ENST00000428744 DNAH2Q9P225 4427 aa1.24□□□□□ -2.21
KIF3A-204ENST00000428744 PKD1P98161 4303 aa1.24□□□□□ -2.21
KIF3A-204ENST00000428744 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
KIF3A-204ENST00000428744 KMT2DO14686 5537 aa1.23□□□□□ -2.21
KIF3A-204ENST00000428744 USH2AO75445 5202 aa1.22□□□□□ -2.21
KIF3A-204ENST00000428744 LRP1Q07954 4544 aaKnown RBP1.22□□□□□ -2.21
KIF3A-204ENST00000428744 DNAH5Q8TE73 4624 aa1.19□□□□□ -2.22
KIF3A-204ENST00000428744 SMR3BP02814 79 aaPredicted RBP1.19□□□□□ -2.22
KIF3A-204ENST00000428744 VPS13BQ7Z7G8 4022 aa1.18□□□□□ -2.22
KIF3A-204ENST00000428744 MUC12Q9UKN1 5478 aa1.17□□□□□ -2.22
KIF3A-204ENST00000428744 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.22
KIF3A-204ENST00000428744 SPRR2GQ9BYE4 73 aa1.15□□□□□ -2.23
KIF3A-204ENST00000428744 DSTQ03001 7570 aaKnown RBP1.14□□□□□ -2.23
KIF3A-204ENST00000428744 FLGP20930 4061 aaPredicted RBP1.14□□□□□ -2.23
KIF3A-204ENST00000428744 MUC5BQ9HC84 5762 aaPredicted RBP1.13□□□□□ -2.23
KIF3A-204ENST00000428744 KRTAP19-5Q3LI72 72 aa1.12□□□□□ -2.23
KIF3A-204ENST00000428744 TNXBP22105 4242 aa1.1□□□□□ -2.23
KIF3A-204ENST00000428744 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
KIF3A-204ENST00000428744 KRTAP5-10Q6L8G5 202 aa1.08□□□□□ -2.24
KIF3A-204ENST00000428744 LPAP08519 4548 aa1.07□□□□□ -2.24
KIF3A-204ENST00000428744 MT1AP04731 61 aa1.07□□□□□ -2.24
KIF3A-204ENST00000428744 PRM1P04553 51 aa1.06□□□□□ -2.24
KIF3A-204ENST00000428744 KRTAP19-8Q3LI54 63 aa1.05□□□□□ -2.24
KIF3A-204ENST00000428744 KRTAP19-2Q3LHN2 52 aa1.04□□□□□ -2.24
KIF3A-204ENST00000428744 MUC17Q685J3 4493 aa1.02□□□□□ -2.25
KIF3A-204ENST00000428744 MT1EP04732 61 aa1.02□□□□□ -2.25
KIF3A-204ENST00000428744 MT1XP80297 61 aa1.01□□□□□ -2.25
KIF3A-204ENST00000428744 MUC5ACP98088 5654 aa1□□□□□ -2.25
KIF3A-204ENST00000428744 MT1LQ93083 61 aa0.99□□□□□ -2.25
KIF3A-204ENST00000428744 MT1HL1P0DM35 61 aa0.96□□□□□ -2.26
KIF3A-204ENST00000428744 SPRR2BP35325 72 aa0.95□□□□□ -2.26
KIF3A-204ENST00000428744 SPRR2AP35326 72 aa0.95□□□□□ -2.26
KIF3A-204ENST00000428744 SPRR2FQ96RM1 72 aa0.94□□□□□ -2.26
KIF3A-204ENST00000428744 MT1BP07438 61 aa0.93□□□□□ -2.26
KIF3A-204ENST00000428744 SPRR2DP22532 72 aa0.92□□□□□ -2.26
KIF3A-204ENST00000428744 KRTAP6-2Q3LI66 62 aa0.91□□□□□ -2.26
KIF3A-204ENST00000428744 KRTAP19-6Q3LI70 58 aa0.91□□□□□ -2.26
KIF3A-204ENST00000428744 MT1HP80294 61 aa0.9□□□□□ -2.27
KIF3A-204ENST00000428744 KRTAP19-7Q3SYF9 63 aa0.89□□□□□ -2.27
KIF3A-204ENST00000428744 SPRR2EP22531 72 aa0.88□□□□□ -2.27
KIF3A-204ENST00000428744 MT2AP02795 61 aa0.86□□□□□ -2.27
KIF3A-204ENST00000428744 MT1FP04733 61 aa0.84□□□□□ -2.27
KIF3A-204ENST00000428744 SYNE1Q8NF91 8797 aaKnown RBP0.84□□□□□ -2.28
KIF3A-204ENST00000428744 MT1GP13640 62 aa0.82□□□□□ -2.28
KIF3A-204ENST00000428744 KRTAP19-3Q7Z4W3 81 aa0.82□□□□□ -2.28
KIF3A-204ENST00000428744 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
KIF3A-204ENST00000428744 MT4P47944 62 aa0.81□□□□□ -2.28
KIF3A-204ENST00000428744 MT1MQ8N339 61 aa0.8□□□□□ -2.28
KIF3A-204ENST00000428744 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
KIF3A-204ENST00000428744 KRTAP6-1Q3LI64 71 aa0.73□□□□□ -2.29
KIF3A-204ENST00000428744 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
KIF3A-204ENST00000428744 KRTAP20-2Q3LI61 65 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 62.8 ms