RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 MT4P47944 62 aa5.49□□□□□ -1.53
SEC13-210ENST00000428626 Q1T7F1 81 aa5.49□□□□□ -1.53
SEC13-210ENST00000428626 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
SEC13-210ENST00000428626 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
SEC13-210ENST00000428626 LINC01558Q9Y6Z2 57 aa5.47□□□□□ -1.53
SEC13-210ENST00000428626 PRR15LQ9BU68 103 aa5.43□□□□□ -1.54
SEC13-210ENST00000428626 LCE3AQ5TA76 89 aa5.42□□□□□ -1.54
SEC13-210ENST00000428626 A0A1B0GU69 56 aa5.41□□□□□ -1.54
SEC13-210ENST00000428626 A8MU10 97 aa5.41□□□□□ -1.54
SEC13-210ENST00000428626 KRTAP5-4Q6L8H1 288 aa5.41□□□□□ -1.54
SEC13-210ENST00000428626 C10orf95Q9H7T3 257 aa5.41□□□□□ -1.54
SEC13-210ENST00000428626 AHNAK2Q8IVF2 5795 aa5.38□□□□□ -1.55
SEC13-210ENST00000428626 KRTAP4-6Q9BYQ5 205 aa5.36□□□□□ -1.55
SEC13-210ENST00000428626 PSPHP1O15172 72 aa5.33□□□□□ -1.56
SEC13-210ENST00000428626 KRTAP5-10Q6L8G5 202 aa5.3□□□□□ -1.56
SEC13-210ENST00000428626 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
SEC13-210ENST00000428626 TNP1P09430 55 aa5.29□□□□□ -1.56
SEC13-210ENST00000428626 UQCR11O14957 56 aa5.25□□□□□ -1.57
SEC13-210ENST00000428626 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
SEC13-210ENST00000428626 A6NED7 52 aa5.22□□□□□ -1.57
SEC13-210ENST00000428626 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
SEC13-210ENST00000428626 MIR22HGQ0VDD5 57 aa5.16□□□□□ -1.58
SEC13-210ENST00000428626 KRTAP5-3Q6L8H2 238 aa5.13□□□□□ -1.59
SEC13-210ENST00000428626 CDC42SE1Q9NRR8 79 aa5.13□□□□□ -1.59
SEC13-210ENST00000428626 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
SEC13-210ENST00000428626 KRTAP20-2Q3LI61 65 aa5.11□□□□□ -1.59
SEC13-210ENST00000428626 KRTAP5-7Q6L8G8 165 aa5.1□□□□□ -1.59
SEC13-210ENST00000428626 A0A0A0MQY5 61 aa5.08□□□□□ -1.6
SEC13-210ENST00000428626 BRK1Q8WUW1 75 aa5.07□□□□□ -1.6
SEC13-210ENST00000428626 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
SEC13-210ENST00000428626 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
SEC13-210ENST00000428626 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
SEC13-210ENST00000428626 K7ERS5 55 aa5.01□□□□□ -1.61
SEC13-210ENST00000428626 PRO0628Q9UI54 55 aa4.96□□□□□ -1.62
SEC13-210ENST00000428626 KRTAP12-4P60329 112 aa4.94□□□□□ -1.62
SEC13-210ENST00000428626 KRTAP25-1Q3LHN0 102 aa4.9□□□□□ -1.63
SEC13-210ENST00000428626 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
SEC13-210ENST00000428626 PMAIP1Q13794 54 aa4.82□□□□□ -1.64
SEC13-210ENST00000428626 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
SEC13-210ENST00000428626 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
SEC13-210ENST00000428626 ROMO1P60602 79 aa4.73□□□□□ -1.65
SEC13-210ENST00000428626 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
SEC13-210ENST00000428626 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
SEC13-210ENST00000428626 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
SEC13-210ENST00000428626 MT1AP04731 61 aa4.68□□□□□ -1.66
SEC13-210ENST00000428626 KTN1-AS1Q86SY8 53 aa4.61□□□□□ -1.67
SEC13-210ENST00000428626 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
SEC13-210ENST00000428626 KRTAP5-8O75690 187 aa4.58□□□□□ -1.68
SEC13-210ENST00000428626 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
SEC13-210ENST00000428626 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
SEC13-210ENST00000428626 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
SEC13-210ENST00000428626 MUC5BQ9HC84 5762 aaPredicted RBP4.47□□□□□ -1.69
SEC13-210ENST00000428626 AHNAKQ09666 5890 aaKnown RBP4.45□□□□□ -1.7
SEC13-210ENST00000428626 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
SEC13-210ENST00000428626 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
SEC13-210ENST00000428626 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
SEC13-210ENST00000428626 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
SEC13-210ENST00000428626 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
SEC13-210ENST00000428626 MT3P25713 68 aa4.25□□□□□ -1.73
SEC13-210ENST00000428626 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
SEC13-210ENST00000428626 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
SEC13-210ENST00000428626 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
SEC13-210ENST00000428626 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
SEC13-210ENST00000428626 LUZP6Q538Z0 58 aa3.75□□□□□ -1.81
SEC13-210ENST00000428626 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
SEC13-210ENST00000428626 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
SEC13-210ENST00000428626 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
SEC13-210ENST00000428626 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
SEC13-210ENST00000428626 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
SEC13-210ENST00000428626 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
SEC13-210ENST00000428626 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
SEC13-210ENST00000428626 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
SEC13-210ENST00000428626 INE1O15225 51 aa2.99□□□□□ -1.93
SEC13-210ENST00000428626 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
SEC13-210ENST00000428626 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
SEC13-210ENST00000428626 PRM1P04553 51 aa2.43□□□□□ -2.02
SEC13-210ENST00000428626 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
SEC13-210ENST00000428626 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 157.5 ms