RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 CDC42SE1Q9NRR8 79 aa8.66□□□□□ -1.02
GLI3-202ENST00000428534 KRTAP19-5Q3LI72 72 aa8.65□□□□□ -1.02
GLI3-202ENST00000428534 KRTAP19-3Q7Z4W3 81 aa8.56□□□□□ -1.04
GLI3-202ENST00000428534 LCE5AQ5TCM9 118 aa8.5□□□□□ -1.05
GLI3-202ENST00000428534 GPR98Q8WXG9 6306 aa8.47□□□□□ -1.05
GLI3-202ENST00000428534 MT1GP13640 62 aa8.45□□□□□ -1.06
GLI3-202ENST00000428534 KRTAP23-1A1A580 65 aa8.44□□□□□ -1.06
GLI3-202ENST00000428534 PP632Q6XCG6 107 aa8.44□□□□□ -1.06
GLI3-202ENST00000428534 DSTQ03001 7570 aaKnown RBP8.44□□□□□ -1.06
GLI3-202ENST00000428534 ROMO1P60602 79 aa8.43□□□□□ -1.06
GLI3-202ENST00000428534 KRTAP12-3P60328 96 aa8.4□□□□□ -1.06
GLI3-202ENST00000428534 MT1LQ93083 61 aa8.36□□□□□ -1.07
GLI3-202ENST00000428534 KRTAP4-9Q9BYQ8 210 aa8.26□□□□□ -1.09
GLI3-202ENST00000428534 MT1MQ8N339 61 aa8.23□□□□□ -1.09
GLI3-202ENST00000428534 KRTAP19-4Q3LI73 84 aa8.15□□□□□ -1.1
GLI3-202ENST00000428534 BRK1Q8WUW1 75 aa8.15□□□□□ -1.1
GLI3-202ENST00000428534 KRTAP15-1Q3LI76 137 aa8.01□□□□□ -1.13
GLI3-202ENST00000428534 LCE1DQ5T752 114 aa8.01□□□□□ -1.13
GLI3-202ENST00000428534 HMCN1Q96RW7 5635 aa7.94□□□□□ -1.14
GLI3-202ENST00000428534 KRTAP4-3Q9BYR4 195 aa7.91□□□□□ -1.14
GLI3-202ENST00000428534 MT4P47944 62 aa7.87□□□□□ -1.15
GLI3-202ENST00000428534 KRTAP4-7Q9BYR0 210 aa7.87□□□□□ -1.15
GLI3-202ENST00000428534 LCE4AQ5TA78 99 aa7.84□□□□□ -1.15
GLI3-202ENST00000428534 AHNAK2Q8IVF2 5795 aa7.82□□□□□ -1.16
GLI3-202ENST00000428534 LCE3CQ5T5A8 94 aa7.77□□□□□ -1.17
GLI3-202ENST00000428534 PMAIP1Q13794 54 aa7.72□□□□□ -1.17
GLI3-202ENST00000428534 KRTAP5-4Q6L8H1 288 aa7.66□□□□□ -1.18
GLI3-202ENST00000428534 KRTAP5-10Q6L8G5 202 aa7.64□□□□□ -1.19
GLI3-202ENST00000428534 KRTAP4-6Q9BYQ5 205 aa7.61□□□□□ -1.19
GLI3-202ENST00000428534 KRTAP5-5Q701N2 237 aaPredicted RBP7.49□□□□□ -1.21
GLI3-202ENST00000428534 PRO0628Q9UI54 55 aa7.49□□□□□ -1.21
GLI3-202ENST00000428534 LOC100996750A0A140TA64 210 aa7.45□□□□□ -1.22
GLI3-202ENST00000428534 KRTAP5-7Q6L8G8 165 aa7.38□□□□□ -1.23
GLI3-202ENST00000428534 KRTAP5-3Q6L8H2 238 aa7.37□□□□□ -1.23
GLI3-202ENST00000428534 KRTAP12-4P60329 112 aa7.31□□□□□ -1.24
GLI3-202ENST00000428534 KRTAP20-2Q3LI61 65 aa7.26□□□□□ -1.25
GLI3-202ENST00000428534 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
GLI3-202ENST00000428534 PRAC1Q96KF2 57 aa7.2□□□□□ -1.26
GLI3-202ENST00000428534 KRTAP9-6A8MVA2 160 aa7.19□□□□□ -1.26
GLI3-202ENST00000428534 MT1AP04731 61 aa7.15□□□□□ -1.26
GLI3-202ENST00000428534 KTN1-AS1Q86SY8 53 aa7.07□□□□□ -1.28
GLI3-202ENST00000428534 SYNE1Q8NF91 8797 aaKnown RBP7.04□□□□□ -1.28
GLI3-202ENST00000428534 KRTAP6-1Q3LI64 71 aa7.02□□□□□ -1.29
GLI3-202ENST00000428534 KRTAP9-4Q9BYQ2 154 aa6.88□□□□□ -1.31
GLI3-202ENST00000428534 KRTAP5-2Q701N4 177 aa6.73□□□□□ -1.33
GLI3-202ENST00000428534 SVIPQ8NHG7 77 aa6.72□□□□□ -1.33
GLI3-202ENST00000428534 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
GLI3-202ENST00000428534 KRTAP6-2Q3LI66 62 aa6.64□□□□□ -1.35
GLI3-202ENST00000428534 MT3P25713 68 aa6.58□□□□□ -1.36
GLI3-202ENST00000428534 KRTAP5-8O75690 187 aa6.52□□□□□ -1.37
GLI3-202ENST00000428534 AHNAKQ09666 5890 aaKnown RBP6.49□□□□□ -1.37
GLI3-202ENST00000428534 MUC5BQ9HC84 5762 aaPredicted RBP6.48□□□□□ -1.37
GLI3-202ENST00000428534 MUC5ACP98088 5654 aa6.47□□□□□ -1.37
GLI3-202ENST00000428534 OBSCNQ5VST9 7968 aa6.4□□□□□ -1.39
GLI3-202ENST00000428534 LUZP6Q538Z0 58 aa6.24□□□□□ -1.41
GLI3-202ENST00000428534 KRTAP9-9Q9BYP9 154 aa6.21□□□□□ -1.42
GLI3-202ENST00000428534 KRTAP5-1Q6L8H4 278 aa6.04□□□□□ -1.44
GLI3-202ENST00000428534 LCE1EQ5T753 118 aa5.95□□□□□ -1.46
GLI3-202ENST00000428534 LCE3DQ9BYE3 92 aa5.72□□□□□ -1.49
GLI3-202ENST00000428534 LCE1CQ5T751 118 aa5.5□□□□□ -1.53
GLI3-202ENST00000428534 LCE1BQ5T7P3 118 aa5.5□□□□□ -1.53
GLI3-202ENST00000428534 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
GLI3-202ENST00000428534 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.54
GLI3-202ENST00000428534 NDUFAF8A1L188 74 aa5.26□□□□□ -1.57
GLI3-202ENST00000428534 KRTAP4-12Q9BQ66 201 aa5.2□□□□□ -1.58
GLI3-202ENST00000428534 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.05□□□□□ -1.6
GLI3-202ENST00000428534 KRTAP5-11Q6L8G4 156 aa4.93□□□□□ -1.62
GLI3-202ENST00000428534 LCE1FQ5T754 118 aa4.76□□□□□ -1.65
GLI3-202ENST00000428534 KRTAP21-2Q3LI59 83 aa4.63□□□□□ -1.67
GLI3-202ENST00000428534 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
GLI3-202ENST00000428534 PHGR1C9JFL3 82 aa4.46□□□□□ -1.7
GLI3-202ENST00000428534 INE1O15225 51 aa4.43□□□□□ -1.7
GLI3-202ENST00000428534 PRM1P04553 51 aa4.28□□□□□ -1.72
GLI3-202ENST00000428534 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
GLI3-202ENST00000428534 MUC19Q7Z5P9 8384 aa3.96□□□□□ -1.78
GLI3-202ENST00000428534 H3BS24 57 aa3.44□□□□□ -1.86
GLI3-202ENST00000428534 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
GLI3-202ENST00000428534 MUC16Q8WXI7 14507 aa2.84□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 77.2 ms