RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 KRTAP12-4P60329 112 aa4□□□□□ -1.77
DDX39B-208ENST00000428098 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
DDX39B-208ENST00000428098 TMEM258P61165 79 aa3.97□□□□□ -1.77
DDX39B-208ENST00000428098 MP68P56378 58 aa3.96□□□□□ -1.78
DDX39B-208ENST00000428098 SNURFQ9Y675 71 aa3.95□□□□□ -1.78
DDX39B-208ENST00000428098 H3BPC8 53 aa3.94□□□□□ -1.78
DDX39B-208ENST00000428098 H7BZZ5 65 aa3.93□□□□□ -1.78
DDX39B-208ENST00000428098 CAMK2N1Q7Z7J9 78 aa3.93□□□□□ -1.78
DDX39B-208ENST00000428098 H0Y9P7 68 aa3.92□□□□□ -1.78
DDX39B-208ENST00000428098 ATP5EP56381 51 aaPredicted RBP3.92□□□□□ -1.78
DDX39B-208ENST00000428098 LINC00208Q96KT6 92 aa3.89□□□□□ -1.79
DDX39B-208ENST00000428098 RPS28P62857 69 aaKnown RBP3.88□□□□□ -1.79
DDX39B-208ENST00000428098 SERP1Q9Y6X1 66 aa3.86□□□□□ -1.79
DDX39B-208ENST00000428098 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
DDX39B-208ENST00000428098 SPANXA2-OT1Q8N9U9 137 aa3.83□□□□□ -1.8
DDX39B-208ENST00000428098 KRTAP13-4Q3LI77 160 aa3.82□□□□□ -1.8
DDX39B-208ENST00000428098 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
DDX39B-208ENST00000428098 C10orf95Q9H7T3 257 aa3.8□□□□□ -1.8
DDX39B-208ENST00000428098 SMIM26A0A096LP01 95 aa3.77□□□□□ -1.81
DDX39B-208ENST00000428098 DMAC1Q96GE9 116 aa3.76□□□□□ -1.81
DDX39B-208ENST00000428098 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
DDX39B-208ENST00000428098 ACYP2P14621 99 aa3.7□□□□□ -1.82
DDX39B-208ENST00000428098 COA5Q86WW8 74 aa3.7□□□□□ -1.82
DDX39B-208ENST00000428098 V9GYY9 64 aa3.69□□□□□ -1.82
DDX39B-208ENST00000428098 CHKB-CPT1BH3BT56 60 aa3.67□□□□□ -1.82
DDX39B-208ENST00000428098 SVIPQ8NHG7 77 aa3.67□□□□□ -1.82
DDX39B-208ENST00000428098 Q1T7F1 81 aa3.66□□□□□ -1.82
DDX39B-208ENST00000428098 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
DDX39B-208ENST00000428098 SPTSSBQ8NFR3 76 aa3.6□□□□□ -1.83
DDX39B-208ENST00000428098 PSPHP1O15172 72 aa3.58□□□□□ -1.84
DDX39B-208ENST00000428098 PRR15LQ9BU68 103 aa3.58□□□□□ -1.84
DDX39B-208ENST00000428098 LINC01558Q9Y6Z2 57 aa3.58□□□□□ -1.84
DDX39B-208ENST00000428098 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
DDX39B-208ENST00000428098 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
DDX39B-208ENST00000428098 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
DDX39B-208ENST00000428098 SPINT4Q6UDR6 99 aa3.54□□□□□ -1.84
DDX39B-208ENST00000428098 A0A1B0GU69 56 aa3.52□□□□□ -1.85
DDX39B-208ENST00000428098 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
DDX39B-208ENST00000428098 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
DDX39B-208ENST00000428098 SEC61GP60059 68 aa3.51□□□□□ -1.85
DDX39B-208ENST00000428098 BRK1Q8WUW1 75 aa3.51□□□□□ -1.85
DDX39B-208ENST00000428098 A6NED7 52 aa3.5□□□□□ -1.85
DDX39B-208ENST00000428098 MT1AP04731 61 aa3.49□□□□□ -1.85
DDX39B-208ENST00000428098 KRTAP12-1P59990 96 aa3.49□□□□□ -1.85
DDX39B-208ENST00000428098 PRO0628Q9UI54 55 aa3.48□□□□□ -1.85
DDX39B-208ENST00000428098 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
DDX39B-208ENST00000428098 TNP1P09430 55 aa3.44□□□□□ -1.86
DDX39B-208ENST00000428098 SPATA8Q6RVD6 105 aa3.44□□□□□ -1.86
DDX39B-208ENST00000428098 UQCR11O14957 56 aa3.43□□□□□ -1.86
DDX39B-208ENST00000428098 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
DDX39B-208ENST00000428098 MIR22HGQ0VDD5 57 aa3.4□□□□□ -1.87
DDX39B-208ENST00000428098 A0A1B0GU33 70 aa3.38□□□□□ -1.87
DDX39B-208ENST00000428098 A8MU10 97 aa3.35□□□□□ -1.87
DDX39B-208ENST00000428098 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
DDX39B-208ENST00000428098 MT3P25713 68 aa3.29□□□□□ -1.88
DDX39B-208ENST00000428098 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
DDX39B-208ENST00000428098 K7ERS5 55 aa3.28□□□□□ -1.88
DDX39B-208ENST00000428098 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
DDX39B-208ENST00000428098 KTN1-AS1Q86SY8 53 aa3.21□□□□□ -1.9
DDX39B-208ENST00000428098 KRTAP25-1Q3LHN0 102 aa3.17□□□□□ -1.9
DDX39B-208ENST00000428098 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
DDX39B-208ENST00000428098 ROMO1P60602 79 aa3.12□□□□□ -1.91
DDX39B-208ENST00000428098 PRAC1Q96KF2 57 aa3.06□□□□□ -1.92
DDX39B-208ENST00000428098 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
DDX39B-208ENST00000428098 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
DDX39B-208ENST00000428098 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
DDX39B-208ENST00000428098 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
DDX39B-208ENST00000428098 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
DDX39B-208ENST00000428098 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
DDX39B-208ENST00000428098 LUZP6Q538Z0 58 aa2.56□□□□□ -2
DDX39B-208ENST00000428098 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
DDX39B-208ENST00000428098 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
DDX39B-208ENST00000428098 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
DDX39B-208ENST00000428098 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
DDX39B-208ENST00000428098 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
DDX39B-208ENST00000428098 INE1O15225 51 aa2.1□□□□□ -2.07
DDX39B-208ENST00000428098 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
DDX39B-208ENST00000428098 PRM1P04553 51 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 9.5 ms