RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 SPANXA2-OT1Q8N9U9 137 aa3.33□□□□□ -1.88
LSG1-202ENST00000427461 CYP4F30PQ9H0H9 118 aa3.33□□□□□ -1.88
LSG1-202ENST00000427461 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
LSG1-202ENST00000427461 SMIM26A0A096LP01 95 aa3.32□□□□□ -1.88
LSG1-202ENST00000427461 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
LSG1-202ENST00000427461 M0QZ58 72 aa3.31□□□□□ -1.88
LSG1-202ENST00000427461 MT1MQ8N339 61 aa3.31□□□□□ -1.88
LSG1-202ENST00000427461 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
LSG1-202ENST00000427461 LOC101927531A0A1B0GV80 90 aa3.28□□□□□ -1.88
LSG1-202ENST00000427461 PP632Q6XCG6 107 aa3.28□□□□□ -1.88
LSG1-202ENST00000427461 P0C880 135 aa3.27□□□□□ -1.89
LSG1-202ENST00000427461 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
LSG1-202ENST00000427461 Q1T7F1 81 aa3.22□□□□□ -1.89
LSG1-202ENST00000427461 COA5Q86WW8 74 aa3.21□□□□□ -1.9
LSG1-202ENST00000427461 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
LSG1-202ENST00000427461 V9GYY9 64 aa3.2□□□□□ -1.9
LSG1-202ENST00000427461 KRTAP19-5Q3LI72 72 aa3.19□□□□□ -1.9
LSG1-202ENST00000427461 DMAC1Q96GE9 116 aa3.19□□□□□ -1.9
LSG1-202ENST00000427461 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
LSG1-202ENST00000427461 ACYP2P14621 99 aa3.18□□□□□ -1.9
LSG1-202ENST00000427461 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
LSG1-202ENST00000427461 MT1LQ93083 61 aa3.17□□□□□ -1.9
LSG1-202ENST00000427461 LINC01558Q9Y6Z2 57 aa3.14□□□□□ -1.91
LSG1-202ENST00000427461 PSPHP1O15172 72 aa3.13□□□□□ -1.91
LSG1-202ENST00000427461 CHKB-CPT1BH3BT56 60 aa3.11□□□□□ -1.91
LSG1-202ENST00000427461 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
LSG1-202ENST00000427461 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
LSG1-202ENST00000427461 PRO0628Q9UI54 55 aa3.11□□□□□ -1.91
LSG1-202ENST00000427461 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
LSG1-202ENST00000427461 BRK1Q8WUW1 75 aa3.08□□□□□ -1.92
LSG1-202ENST00000427461 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
LSG1-202ENST00000427461 A0A0D9SG42 100 aa3.04□□□□□ -1.92
LSG1-202ENST00000427461 SPTSSBQ8NFR3 76 aa3.04□□□□□ -1.92
LSG1-202ENST00000427461 A6NED7 52 aa3.03□□□□□ -1.92
LSG1-202ENST00000427461 A0A1B0GU69 56 aa3.02□□□□□ -1.93
LSG1-202ENST00000427461 CDC42SE1Q9NRR8 79 aa3.01□□□□□ -1.93
LSG1-202ENST00000427461 A8MU10 97 aa2.99□□□□□ -1.93
LSG1-202ENST00000427461 SPATA8Q6RVD6 105 aa2.98□□□□□ -1.93
LSG1-202ENST00000427461 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
LSG1-202ENST00000427461 CAMK2N1Q7Z7J9 78 aa2.98□□□□□ -1.93
LSG1-202ENST00000427461 SEC61GP60059 68 aa2.97□□□□□ -1.93
LSG1-202ENST00000427461 UQCR11O14957 56 aa2.96□□□□□ -1.94
LSG1-202ENST00000427461 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.94
LSG1-202ENST00000427461 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
LSG1-202ENST00000427461 MIR22HGQ0VDD5 57 aa2.94□□□□□ -1.94
LSG1-202ENST00000427461 PMAIP1Q13794 54 aa2.94□□□□□ -1.94
LSG1-202ENST00000427461 A0A1B0GU33 70 aa2.92□□□□□ -1.94
LSG1-202ENST00000427461 C10orf95Q9H7T3 257 aa2.89□□□□□ -1.95
LSG1-202ENST00000427461 KTN1-AS1Q86SY8 53 aa2.84□□□□□ -1.95
LSG1-202ENST00000427461 KRTAP13-4Q3LI77 160 aa2.82□□□□□ -1.96
LSG1-202ENST00000427461 LCE3AQ5TA76 89 aa2.82□□□□□ -1.96
LSG1-202ENST00000427461 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
LSG1-202ENST00000427461 K7ERS5 55 aa2.78□□□□□ -1.96
LSG1-202ENST00000427461 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
LSG1-202ENST00000427461 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
LSG1-202ENST00000427461 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
LSG1-202ENST00000427461 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
LSG1-202ENST00000427461 ROMO1P60602 79 aa2.7□□□□□ -1.98
LSG1-202ENST00000427461 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
LSG1-202ENST00000427461 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
LSG1-202ENST00000427461 MT1AP04731 61 aa2.67□□□□□ -1.98
LSG1-202ENST00000427461 KRTAP12-3P60328 96 aa2.67□□□□□ -1.98
LSG1-202ENST00000427461 SPINT4Q6UDR6 99 aa2.67□□□□□ -1.98
LSG1-202ENST00000427461 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
LSG1-202ENST00000427461 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
LSG1-202ENST00000427461 TNP1P09430 55 aa2.57□□□□□ -2
LSG1-202ENST00000427461 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
LSG1-202ENST00000427461 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
LSG1-202ENST00000427461 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
LSG1-202ENST00000427461 LUZP6Q538Z0 58 aa2.25□□□□□ -2.05
LSG1-202ENST00000427461 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
LSG1-202ENST00000427461 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
LSG1-202ENST00000427461 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
LSG1-202ENST00000427461 INE1O15225 51 aa1.86□□□□□ -2.11
LSG1-202ENST00000427461 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
LSG1-202ENST00000427461 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
LSG1-202ENST00000427461 PRM1P04553 51 aa1.4□□□□□ -2.19
LSG1-202ENST00000427461 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 44.3 ms