RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 LCE1AQ5T7P2 110 aa6.26□□□□□ -1.41
AFF3-208ENST00000427118 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
AFF3-208ENST00000427118 KRTAP2-3P0C7H8 128 aa6.21□□□□□ -1.42
AFF3-208ENST00000427118 KRTAP2-4Q9BYR9 128 aa6.21□□□□□ -1.42
AFF3-208ENST00000427118 SPRR2DP22532 72 aa6.11□□□□□ -1.43
AFF3-208ENST00000427118 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
AFF3-208ENST00000427118 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
AFF3-208ENST00000427118 KRTAP2-2Q9BYT5 123 aa6.01□□□□□ -1.45
AFF3-208ENST00000427118 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
AFF3-208ENST00000427118 KRTAP19-7Q3SYF9 63 aa5.94□□□□□ -1.46
AFF3-208ENST00000427118 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
AFF3-208ENST00000427118 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
AFF3-208ENST00000427118 MT1EP04732 61 aa5.88□□□□□ -1.47
AFF3-208ENST00000427118 LCE5AQ5TCM9 118 aa5.82□□□□□ -1.48
AFF3-208ENST00000427118 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
AFF3-208ENST00000427118 KRTAP19-3Q7Z4W3 81 aa5.8□□□□□ -1.48
AFF3-208ENST00000427118 LUZP6Q538Z0 58 aa5.79□□□□□ -1.48
AFF3-208ENST00000427118 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
AFF3-208ENST00000427118 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.49
AFF3-208ENST00000427118 MT1GP13640 62 aa5.68□□□□□ -1.5
AFF3-208ENST00000427118 MT1LQ93083 61 aa5.66□□□□□ -1.5
AFF3-208ENST00000427118 NDUFAF8A1L188 74 aa5.63□□□□□ -1.51
AFF3-208ENST00000427118 LCE3CQ5T5A8 94 aa5.63□□□□□ -1.51
AFF3-208ENST00000427118 MT1MQ8N339 61 aa5.6□□□□□ -1.51
AFF3-208ENST00000427118 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
AFF3-208ENST00000427118 KRTAP4-3Q9BYR4 195 aa5.53□□□□□ -1.52
AFF3-208ENST00000427118 LCE1DQ5T752 114 aa5.42□□□□□ -1.54
AFF3-208ENST00000427118 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
AFF3-208ENST00000427118 MT4P47944 62 aa5.37□□□□□ -1.55
AFF3-208ENST00000427118 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
AFF3-208ENST00000427118 GPR98Q8WXG9 6306 aa5.34□□□□□ -1.56
AFF3-208ENST00000427118 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
AFF3-208ENST00000427118 KRTAP5-4Q6L8H1 288 aa5.31□□□□□ -1.56
AFF3-208ENST00000427118 KRTAP4-6Q9BYQ5 205 aa5.23□□□□□ -1.57
AFF3-208ENST00000427118 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
AFF3-208ENST00000427118 H3BS24 57 aa5.17□□□□□ -1.58
AFF3-208ENST00000427118 KRTAP5-5Q701N2 237 aaPredicted RBP5.13□□□□□ -1.59
AFF3-208ENST00000427118 AHNAK2Q8IVF2 5795 aa5.12□□□□□ -1.59
AFF3-208ENST00000427118 A0A0A0MQY5 61 aa5.12□□□□□ -1.59
AFF3-208ENST00000427118 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
AFF3-208ENST00000427118 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
AFF3-208ENST00000427118 KRTAP5-10Q6L8G5 202 aa5.02□□□□□ -1.61
AFF3-208ENST00000427118 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
AFF3-208ENST00000427118 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
AFF3-208ENST00000427118 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
AFF3-208ENST00000427118 MT1AP04731 61 aa4.83□□□□□ -1.64
AFF3-208ENST00000427118 KRTAP5-7Q6L8G8 165 aa4.79□□□□□ -1.64
AFF3-208ENST00000427118 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
AFF3-208ENST00000427118 INE1O15225 51 aa4.77□□□□□ -1.65
AFF3-208ENST00000427118 KRTAP5-2Q701N4 177 aa4.66□□□□□ -1.66
AFF3-208ENST00000427118 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
AFF3-208ENST00000427118 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
AFF3-208ENST00000427118 KRTAP6-2Q3LI66 62 aa4.55□□□□□ -1.68
AFF3-208ENST00000427118 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
AFF3-208ENST00000427118 MT3P25713 68 aa4.42□□□□□ -1.7
AFF3-208ENST00000427118 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
AFF3-208ENST00000427118 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
AFF3-208ENST00000427118 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
AFF3-208ENST00000427118 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
AFF3-208ENST00000427118 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
AFF3-208ENST00000427118 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
AFF3-208ENST00000427118 MUC5ACP98088 5654 aa4.15□□□□□ -1.75
AFF3-208ENST00000427118 AHNAKQ09666 5890 aaKnown RBP4.13□□□□□ -1.75
AFF3-208ENST00000427118 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
AFF3-208ENST00000427118 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
AFF3-208ENST00000427118 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
AFF3-208ENST00000427118 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
AFF3-208ENST00000427118 PRM1P04553 51 aa3.65□□□□□ -1.83
AFF3-208ENST00000427118 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
AFF3-208ENST00000427118 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
AFF3-208ENST00000427118 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
AFF3-208ENST00000427118 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
AFF3-208ENST00000427118 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
AFF3-208ENST00000427118 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
AFF3-208ENST00000427118 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
AFF3-208ENST00000427118 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
AFF3-208ENST00000427118 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
AFF3-208ENST00000427118 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 56.8 ms