RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
GACAT3-201ENST00000426539 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
GACAT3-201ENST00000426539 DSTQ03001 7570 aaKnown RBP3.76□□□□□ -1.81
GACAT3-201ENST00000426539 A0A1B0GU69 56 aa3.76□□□□□ -1.81
GACAT3-201ENST00000426539 MT1EP04732 61 aa3.76□□□□□ -1.81
GACAT3-201ENST00000426539 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
GACAT3-201ENST00000426539 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
GACAT3-201ENST00000426539 SEC61GP60059 68 aa3.73□□□□□ -1.81
GACAT3-201ENST00000426539 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
GACAT3-201ENST00000426539 A6NED7 52 aa3.72□□□□□ -1.81
GACAT3-201ENST00000426539 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
GACAT3-201ENST00000426539 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
GACAT3-201ENST00000426539 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
GACAT3-201ENST00000426539 PRO0628Q9UI54 55 aa3.7□□□□□ -1.82
GACAT3-201ENST00000426539 UQCR11O14957 56 aa3.66□□□□□ -1.82
GACAT3-201ENST00000426539 CDC42SE1Q9NRR8 79 aa3.66□□□□□ -1.82
GACAT3-201ENST00000426539 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.83
GACAT3-201ENST00000426539 A0A0D9SG42 100 aa3.63□□□□□ -1.83
GACAT3-201ENST00000426539 MT1GP13640 62 aa3.63□□□□□ -1.83
GACAT3-201ENST00000426539 A8MU10 97 aa3.62□□□□□ -1.83
GACAT3-201ENST00000426539 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
GACAT3-201ENST00000426539 SPATA8Q6RVD6 105 aa3.62□□□□□ -1.83
GACAT3-201ENST00000426539 A0A1B0GU33 70 aa3.61□□□□□ -1.83
GACAT3-201ENST00000426539 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
GACAT3-201ENST00000426539 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
GACAT3-201ENST00000426539 MT1MQ8N339 61 aa3.59□□□□□ -1.83
GACAT3-201ENST00000426539 MT4P47944 62 aa3.58□□□□□ -1.84
GACAT3-201ENST00000426539 SPINT4Q6UDR6 99 aa3.58□□□□□ -1.84
GACAT3-201ENST00000426539 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
GACAT3-201ENST00000426539 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
GACAT3-201ENST00000426539 MT1LQ93083 61 aa3.57□□□□□ -1.84
GACAT3-201ENST00000426539 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
GACAT3-201ENST00000426539 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
GACAT3-201ENST00000426539 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
GACAT3-201ENST00000426539 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
GACAT3-201ENST00000426539 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
GACAT3-201ENST00000426539 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
GACAT3-201ENST00000426539 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
GACAT3-201ENST00000426539 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
GACAT3-201ENST00000426539 K7ERS5 55 aa3.47□□□□□ -1.85
GACAT3-201ENST00000426539 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
GACAT3-201ENST00000426539 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
GACAT3-201ENST00000426539 TNP1P09430 55 aa3.4□□□□□ -1.87
GACAT3-201ENST00000426539 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
GACAT3-201ENST00000426539 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
GACAT3-201ENST00000426539 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
GACAT3-201ENST00000426539 ROMO1P60602 79 aa3.32□□□□□ -1.88
GACAT3-201ENST00000426539 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
GACAT3-201ENST00000426539 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
GACAT3-201ENST00000426539 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
GACAT3-201ENST00000426539 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
GACAT3-201ENST00000426539 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
GACAT3-201ENST00000426539 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.9
GACAT3-201ENST00000426539 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
GACAT3-201ENST00000426539 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
GACAT3-201ENST00000426539 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
GACAT3-201ENST00000426539 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
GACAT3-201ENST00000426539 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
GACAT3-201ENST00000426539 MT1AP04731 61 aa3.03□□□□□ -1.92
GACAT3-201ENST00000426539 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
GACAT3-201ENST00000426539 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
GACAT3-201ENST00000426539 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
GACAT3-201ENST00000426539 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
GACAT3-201ENST00000426539 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
GACAT3-201ENST00000426539 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
GACAT3-201ENST00000426539 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
GACAT3-201ENST00000426539 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
GACAT3-201ENST00000426539 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
GACAT3-201ENST00000426539 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
GACAT3-201ENST00000426539 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
GACAT3-201ENST00000426539 INE1O15225 51 aa2.23□□□□□ -2.05
GACAT3-201ENST00000426539 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
GACAT3-201ENST00000426539 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
GACAT3-201ENST00000426539 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
GACAT3-201ENST00000426539 PRM1P04553 51 aa1.73□□□□□ -2.13
GACAT3-201ENST00000426539 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
GACAT3-201ENST00000426539 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 74.8 ms