RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
VEGFB-202ENST00000426086 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
VEGFB-202ENST00000426086 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
VEGFB-202ENST00000426086 SPATA8Q6RVD6 105 aa4.95□□□□□ -1.62
VEGFB-202ENST00000426086 AHNAK2Q8IVF2 5795 aa4.94□□□□□ -1.62
VEGFB-202ENST00000426086 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
VEGFB-202ENST00000426086 MT1GP13640 62 aa4.91□□□□□ -1.62
VEGFB-202ENST00000426086 KRTAP5-7Q6L8G8 165 aa4.91□□□□□ -1.62
VEGFB-202ENST00000426086 UQCR11O14957 56 aa4.9□□□□□ -1.63
VEGFB-202ENST00000426086 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
VEGFB-202ENST00000426086 A0A0D9SG42 100 aa4.87□□□□□ -1.63
VEGFB-202ENST00000426086 MT1MQ8N339 61 aa4.87□□□□□ -1.63
VEGFB-202ENST00000426086 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
VEGFB-202ENST00000426086 A8MU10 97 aa4.85□□□□□ -1.63
VEGFB-202ENST00000426086 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
VEGFB-202ENST00000426086 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
VEGFB-202ENST00000426086 KRTAP4-3Q9BYR4 195 aa4.85□□□□□ -1.63
VEGFB-202ENST00000426086 SPINT4Q6UDR6 99 aa4.82□□□□□ -1.64
VEGFB-202ENST00000426086 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
VEGFB-202ENST00000426086 CAMK2N1Q7Z7J9 78 aa4.81□□□□□ -1.64
VEGFB-202ENST00000426086 MIR22HGQ0VDD5 57 aa4.78□□□□□ -1.64
VEGFB-202ENST00000426086 MT1LQ93083 61 aa4.78□□□□□ -1.64
VEGFB-202ENST00000426086 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
VEGFB-202ENST00000426086 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
VEGFB-202ENST00000426086 ROMO1P60602 79 aa4.71□□□□□ -1.66
VEGFB-202ENST00000426086 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
VEGFB-202ENST00000426086 K7ERS5 55 aa4.65□□□□□ -1.67
VEGFB-202ENST00000426086 KRTAP25-1Q3LHN0 102 aa4.65□□□□□ -1.67
VEGFB-202ENST00000426086 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
VEGFB-202ENST00000426086 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
VEGFB-202ENST00000426086 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
VEGFB-202ENST00000426086 TNP1P09430 55 aa4.55□□□□□ -1.68
VEGFB-202ENST00000426086 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
VEGFB-202ENST00000426086 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
VEGFB-202ENST00000426086 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
VEGFB-202ENST00000426086 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
VEGFB-202ENST00000426086 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
VEGFB-202ENST00000426086 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
VEGFB-202ENST00000426086 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
VEGFB-202ENST00000426086 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
VEGFB-202ENST00000426086 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
VEGFB-202ENST00000426086 KRTAP12-3P60328 96 aa4.3□□□□□ -1.72
VEGFB-202ENST00000426086 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
VEGFB-202ENST00000426086 KRTAP5-8O75690 187 aa4.26□□□□□ -1.73
VEGFB-202ENST00000426086 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
VEGFB-202ENST00000426086 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
VEGFB-202ENST00000426086 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
VEGFB-202ENST00000426086 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
VEGFB-202ENST00000426086 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
VEGFB-202ENST00000426086 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
VEGFB-202ENST00000426086 MT1AP04731 61 aa4.04□□□□□ -1.76
VEGFB-202ENST00000426086 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
VEGFB-202ENST00000426086 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
VEGFB-202ENST00000426086 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
VEGFB-202ENST00000426086 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
VEGFB-202ENST00000426086 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
VEGFB-202ENST00000426086 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
VEGFB-202ENST00000426086 INE1O15225 51 aa3.82□□□□□ -1.8
VEGFB-202ENST00000426086 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
VEGFB-202ENST00000426086 MT3P25713 68 aa3.68□□□□□ -1.82
VEGFB-202ENST00000426086 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
VEGFB-202ENST00000426086 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
VEGFB-202ENST00000426086 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
VEGFB-202ENST00000426086 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
VEGFB-202ENST00000426086 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
VEGFB-202ENST00000426086 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
VEGFB-202ENST00000426086 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
VEGFB-202ENST00000426086 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
VEGFB-202ENST00000426086 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
VEGFB-202ENST00000426086 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
VEGFB-202ENST00000426086 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
VEGFB-202ENST00000426086 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
VEGFB-202ENST00000426086 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
VEGFB-202ENST00000426086 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
VEGFB-202ENST00000426086 PRM1P04553 51 aa2.23□□□□□ -2.05
VEGFB-202ENST00000426086 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
VEGFB-202ENST00000426086 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 29.6 ms