RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 KRTAP19-4Q3LI73 84 aa3.63□□□□□ -1.83
HDLBP-211ENST00000425989 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
HDLBP-211ENST00000425989 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
HDLBP-211ENST00000425989 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
HDLBP-211ENST00000425989 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
HDLBP-211ENST00000425989 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
HDLBP-211ENST00000425989 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
HDLBP-211ENST00000425989 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
HDLBP-211ENST00000425989 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
HDLBP-211ENST00000425989 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
HDLBP-211ENST00000425989 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
HDLBP-211ENST00000425989 KMT2DO14686 5537 aa3.48□□□□□ -1.85
HDLBP-211ENST00000425989 MT1EP04732 61 aa3.48□□□□□ -1.85
HDLBP-211ENST00000425989 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
HDLBP-211ENST00000425989 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
HDLBP-211ENST00000425989 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
HDLBP-211ENST00000425989 MT1GP13640 62 aa3.41□□□□□ -1.86
HDLBP-211ENST00000425989 MT1LQ93083 61 aa3.41□□□□□ -1.86
HDLBP-211ENST00000425989 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
HDLBP-211ENST00000425989 MDN1Q9NU22 5596 aa3.4□□□□□ -1.87
HDLBP-211ENST00000425989 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
HDLBP-211ENST00000425989 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
HDLBP-211ENST00000425989 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
HDLBP-211ENST00000425989 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
HDLBP-211ENST00000425989 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
HDLBP-211ENST00000425989 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
HDLBP-211ENST00000425989 SPRR2EP22531 72 aa3.35□□□□□ -1.87
HDLBP-211ENST00000425989 SPRR2BP35325 72 aa3.35□□□□□ -1.87
HDLBP-211ENST00000425989 SPRR2AP35326 72 aa3.35□□□□□ -1.87
HDLBP-211ENST00000425989 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
HDLBP-211ENST00000425989 LCE5AQ5TCM9 118 aa3.34□□□□□ -1.87
HDLBP-211ENST00000425989 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
HDLBP-211ENST00000425989 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
HDLBP-211ENST00000425989 MT1MQ8N339 61 aa3.28□□□□□ -1.88
HDLBP-211ENST00000425989 SPRR2DP22532 72 aa3.24□□□□□ -1.89
HDLBP-211ENST00000425989 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
HDLBP-211ENST00000425989 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
HDLBP-211ENST00000425989 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
HDLBP-211ENST00000425989 DSTQ03001 7570 aaKnown RBP3.04□□□□□ -1.92
HDLBP-211ENST00000425989 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
HDLBP-211ENST00000425989 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
HDLBP-211ENST00000425989 MT1AP04731 61 aa2.93□□□□□ -1.94
HDLBP-211ENST00000425989 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
HDLBP-211ENST00000425989 A0A0A0MQY5 61 aa2.89□□□□□ -1.95
HDLBP-211ENST00000425989 MT4P47944 62 aa2.89□□□□□ -1.95
HDLBP-211ENST00000425989 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
HDLBP-211ENST00000425989 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
HDLBP-211ENST00000425989 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
HDLBP-211ENST00000425989 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
HDLBP-211ENST00000425989 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
HDLBP-211ENST00000425989 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
HDLBP-211ENST00000425989 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
HDLBP-211ENST00000425989 MT3P25713 68 aa2.71□□□□□ -1.98
HDLBP-211ENST00000425989 INE1O15225 51 aa2.68□□□□□ -1.98
HDLBP-211ENST00000425989 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
HDLBP-211ENST00000425989 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
HDLBP-211ENST00000425989 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
HDLBP-211ENST00000425989 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
HDLBP-211ENST00000425989 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
HDLBP-211ENST00000425989 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
HDLBP-211ENST00000425989 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
HDLBP-211ENST00000425989 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
HDLBP-211ENST00000425989 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
HDLBP-211ENST00000425989 LCE1EQ5T753 118 aa2.4□□□□□ -2.03
HDLBP-211ENST00000425989 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
HDLBP-211ENST00000425989 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
HDLBP-211ENST00000425989 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
HDLBP-211ENST00000425989 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
HDLBP-211ENST00000425989 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
HDLBP-211ENST00000425989 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
HDLBP-211ENST00000425989 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
HDLBP-211ENST00000425989 PRM1P04553 51 aa2.08□□□□□ -2.08
HDLBP-211ENST00000425989 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
HDLBP-211ENST00000425989 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
HDLBP-211ENST00000425989 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
HDLBP-211ENST00000425989 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
HDLBP-211ENST00000425989 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
HDLBP-211ENST00000425989 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 83.3 ms