RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 A8MU10 97 aa4.74□□□□□ -1.65
SGCE-203ENST00000425444 ATP5EP56381 51 aaPredicted RBP4.74□□□□□ -1.65
SGCE-203ENST00000425444 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
SGCE-203ENST00000425444 MT1EP04732 61 aa4.73□□□□□ -1.65
SGCE-203ENST00000425444 PRR15LQ9BU68 103 aa4.73□□□□□ -1.65
SGCE-203ENST00000425444 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
SGCE-203ENST00000425444 TMEM258P61165 79 aa4.68□□□□□ -1.66
SGCE-203ENST00000425444 KRTAP4-2Q9BYR5 136 aa4.68□□□□□ -1.66
SGCE-203ENST00000425444 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
SGCE-203ENST00000425444 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.67
SGCE-203ENST00000425444 KRTAP5-3Q6L8H2 238 aa4.65□□□□□ -1.67
SGCE-203ENST00000425444 TNP1P09430 55 aa4.62□□□□□ -1.67
SGCE-203ENST00000425444 LINC01558Q9Y6Z2 57 aa4.62□□□□□ -1.67
SGCE-203ENST00000425444 PCP4P48539 62 aa4.61□□□□□ -1.67
SGCE-203ENST00000425444 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.67
SGCE-203ENST00000425444 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
SGCE-203ENST00000425444 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
SGCE-203ENST00000425444 MT1GP13640 62 aa4.56□□□□□ -1.68
SGCE-203ENST00000425444 UQCR11O14957 56 aa4.54□□□□□ -1.68
SGCE-203ENST00000425444 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
SGCE-203ENST00000425444 MT1LQ93083 61 aa4.52□□□□□ -1.69
SGCE-203ENST00000425444 MT1MQ8N339 61 aa4.5□□□□□ -1.69
SGCE-203ENST00000425444 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
SGCE-203ENST00000425444 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
SGCE-203ENST00000425444 K7ERS5 55 aa4.4□□□□□ -1.71
SGCE-203ENST00000425444 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
SGCE-203ENST00000425444 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
SGCE-203ENST00000425444 V9GYY9 64 aa4.37□□□□□ -1.71
SGCE-203ENST00000425444 PSPHP1O15172 72 aa4.36□□□□□ -1.71
SGCE-203ENST00000425444 Q1T7F1 81 aa4.34□□□□□ -1.71
SGCE-203ENST00000425444 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
SGCE-203ENST00000425444 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
SGCE-203ENST00000425444 RPS28P62857 69 aaKnown RBP4.33□□□□□ -1.72
SGCE-203ENST00000425444 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
SGCE-203ENST00000425444 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
SGCE-203ENST00000425444 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
SGCE-203ENST00000425444 A6NED7 52 aa4.23□□□□□ -1.73
SGCE-203ENST00000425444 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
SGCE-203ENST00000425444 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
SGCE-203ENST00000425444 CDC42SE1Q9NRR8 79 aa4.14□□□□□ -1.75
SGCE-203ENST00000425444 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
SGCE-203ENST00000425444 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
SGCE-203ENST00000425444 ROMO1P60602 79 aa4.06□□□□□ -1.76
SGCE-203ENST00000425444 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
SGCE-203ENST00000425444 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
SGCE-203ENST00000425444 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
SGCE-203ENST00000425444 BRK1Q8WUW1 75 aa3.93□□□□□ -1.78
SGCE-203ENST00000425444 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
SGCE-203ENST00000425444 MT1AP04731 61 aa3.84□□□□□ -1.79
SGCE-203ENST00000425444 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
SGCE-203ENST00000425444 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
SGCE-203ENST00000425444 PMAIP1Q13794 54 aa3.68□□□□□ -1.82
SGCE-203ENST00000425444 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
SGCE-203ENST00000425444 PRO0628Q9UI54 55 aa3.63□□□□□ -1.83
SGCE-203ENST00000425444 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
SGCE-203ENST00000425444 MT3P25713 68 aa3.53□□□□□ -1.84
SGCE-203ENST00000425444 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
SGCE-203ENST00000425444 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
SGCE-203ENST00000425444 SVIPQ8NHG7 77 aa3.3□□□□□ -1.88
SGCE-203ENST00000425444 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
SGCE-203ENST00000425444 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
SGCE-203ENST00000425444 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
SGCE-203ENST00000425444 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
SGCE-203ENST00000425444 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
SGCE-203ENST00000425444 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
SGCE-203ENST00000425444 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
SGCE-203ENST00000425444 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
SGCE-203ENST00000425444 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
SGCE-203ENST00000425444 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
SGCE-203ENST00000425444 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
SGCE-203ENST00000425444 NDUFAF8A1L188 74 aa2.66□□□□□ -1.98
SGCE-203ENST00000425444 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
SGCE-203ENST00000425444 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
SGCE-203ENST00000425444 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
SGCE-203ENST00000425444 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
SGCE-203ENST00000425444 INE1O15225 51 aa2.11□□□□□ -2.07
SGCE-203ENST00000425444 PRM1P04553 51 aa2.08□□□□□ -2.08
SGCE-203ENST00000425444 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms