RNA–Protein interactions for RNA: ENST00000424894.1

PRDM1-204, Transcript of PR/SET domain 1, humanhuman

TSL 5

Gene PRDM1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-204ENST00000424894 CAMK2N1Q7Z7J9 78 aa2.78□□□□□ -1.96
PRDM1-204ENST00000424894 SPRR2DP22532 72 aa2.75□□□□□ -1.97
PRDM1-204ENST00000424894 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
PRDM1-204ENST00000424894 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
PRDM1-204ENST00000424894 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
PRDM1-204ENST00000424894 KRTAP19-7Q3SYF9 63 aa2.69□□□□□ -1.98
PRDM1-204ENST00000424894 LCE3BQ5TA77 95 aa2.67□□□□□ -1.98
PRDM1-204ENST00000424894 MT1EP04732 61 aa2.65□□□□□ -1.99
PRDM1-204ENST00000424894 KRTAP2-2Q9BYT5 123 aa2.65□□□□□ -1.99
PRDM1-204ENST00000424894 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
PRDM1-204ENST00000424894 KRTAP19-5Q3LI72 72 aa2.64□□□□□ -1.99
PRDM1-204ENST00000424894 C10orf95Q9H7T3 257 aa2.64□□□□□ -1.99
PRDM1-204ENST00000424894 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
PRDM1-204ENST00000424894 LCE5AQ5TCM9 118 aa2.6□□□□□ -1.99
PRDM1-204ENST00000424894 KRTAP19-3Q7Z4W3 81 aa2.6□□□□□ -1.99
PRDM1-204ENST00000424894 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
PRDM1-204ENST00000424894 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
PRDM1-204ENST00000424894 MT1LQ93083 61 aa2.54□□□□□ -2
PRDM1-204ENST00000424894 MT1MQ8N339 61 aa2.53□□□□□ -2
PRDM1-204ENST00000424894 INE1O15225 51 aa2.52□□□□□ -2.01
PRDM1-204ENST00000424894 KRTAP4-7Q9BYR0 210 aa2.52□□□□□ -2.01
PRDM1-204ENST00000424894 DSTQ03001 7570 aaKnown RBP2.51□□□□□ -2.01
PRDM1-204ENST00000424894 TNP1P09430 55 aa2.5□□□□□ -2.01
PRDM1-204ENST00000424894 MT1GP13640 62 aa2.5□□□□□ -2.01
PRDM1-204ENST00000424894 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
PRDM1-204ENST00000424894 MT4P47944 62 aa2.45□□□□□ -2.02
PRDM1-204ENST00000424894 LCE1DQ5T752 114 aa2.45□□□□□ -2.02
PRDM1-204ENST00000424894 PP632Q6XCG6 107 aa2.45□□□□□ -2.02
PRDM1-204ENST00000424894 KRTAP12-3P60328 96 aa2.44□□□□□ -2.02
PRDM1-204ENST00000424894 KRTAP23-1A1A580 65 aa2.43□□□□□ -2.02
PRDM1-204ENST00000424894 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
PRDM1-204ENST00000424894 KRTAP4-6Q9BYQ5 205 aa2.39□□□□□ -2.03
PRDM1-204ENST00000424894 LOC100996750A0A140TA64 210 aa2.38□□□□□ -2.03
PRDM1-204ENST00000424894 LCE4AQ5TA78 99 aa2.36□□□□□ -2.03
PRDM1-204ENST00000424894 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
PRDM1-204ENST00000424894 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
PRDM1-204ENST00000424894 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
PRDM1-204ENST00000424894 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
PRDM1-204ENST00000424894 KRTAP19-4Q3LI73 84 aa2.29□□□□□ -2.04
PRDM1-204ENST00000424894 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
PRDM1-204ENST00000424894 LCE3CQ5T5A8 94 aa2.25□□□□□ -2.05
PRDM1-204ENST00000424894 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
PRDM1-204ENST00000424894 KRTAP9-6A8MVA2 160 aa2.22□□□□□ -2.05
PRDM1-204ENST00000424894 KRTAP6-1Q3LI64 71 aa2.19□□□□□ -2.06
PRDM1-204ENST00000424894 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
PRDM1-204ENST00000424894 KRTAP12-4P60329 112 aa2.17□□□□□ -2.06
PRDM1-204ENST00000424894 SYNE1Q8NF91 8797 aaKnown RBP2.15□□□□□ -2.06
PRDM1-204ENST00000424894 MT1AP04731 61 aa2.13□□□□□ -2.07
PRDM1-204ENST00000424894 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
PRDM1-204ENST00000424894 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
PRDM1-204ENST00000424894 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
PRDM1-204ENST00000424894 KRTAP9-4Q9BYQ2 154 aa2.06□□□□□ -2.08
PRDM1-204ENST00000424894 KRTAP4-11Q9BYQ6 195 aa2.03□□□□□ -2.08
PRDM1-204ENST00000424894 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
PRDM1-204ENST00000424894 MT3P25713 68 aa1.91□□□□□ -2.1
PRDM1-204ENST00000424894 OBSCNQ5VST9 7968 aa1.91□□□□□ -2.1
PRDM1-204ENST00000424894 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
PRDM1-204ENST00000424894 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
PRDM1-204ENST00000424894 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
PRDM1-204ENST00000424894 KRTAP9-9Q9BYP9 154 aa1.82□□□□□ -2.12
PRDM1-204ENST00000424894 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
PRDM1-204ENST00000424894 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
PRDM1-204ENST00000424894 KRTAP4-2Q9BYR5 136 aa1.72□□□□□ -2.13
PRDM1-204ENST00000424894 LCE1EQ5T753 118 aa1.71□□□□□ -2.14
PRDM1-204ENST00000424894 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
PRDM1-204ENST00000424894 KRTAP4-12Q9BQ66 201 aa1.62□□□□□ -2.15
PRDM1-204ENST00000424894 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
PRDM1-204ENST00000424894 LCE3EQ5T5B0 92 aa1.51□□□□□ -2.17
PRDM1-204ENST00000424894 PRM1P04553 51 aa1.5□□□□□ -2.17
PRDM1-204ENST00000424894 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
PRDM1-204ENST00000424894 LCE1FQ5T754 118 aa1.46□□□□□ -2.18
PRDM1-204ENST00000424894 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.46□□□□□ -2.18
PRDM1-204ENST00000424894 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
PRDM1-204ENST00000424894 KRTAP4-4Q9BYR3 166 aa1.38□□□□□ -2.19
PRDM1-204ENST00000424894 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
PRDM1-204ENST00000424894 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
PRDM1-204ENST00000424894 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
PRDM1-204ENST00000424894 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 116.7 ms