RNA–Protein interactions for RNA: ENST00000422944.1

HCG20-207, Transcript of HLA complex group 20, humanhuman

TSL 2

Gene HCG20, Length 1,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-207ENST00000422944 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
HCG20-207ENST00000422944 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
HCG20-207ENST00000422944 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
HCG20-207ENST00000422944 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
HCG20-207ENST00000422944 KRTAP8-1Q8IUC2 63 aa3.88□□□□□ -1.79
HCG20-207ENST00000422944 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
HCG20-207ENST00000422944 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
HCG20-207ENST00000422944 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
HCG20-207ENST00000422944 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
HCG20-207ENST00000422944 KMT2DO14686 5537 aa3.8□□□□□ -1.8
HCG20-207ENST00000422944 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
HCG20-207ENST00000422944 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
HCG20-207ENST00000422944 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
HCG20-207ENST00000422944 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
HCG20-207ENST00000422944 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
HCG20-207ENST00000422944 KRTAP19-5Q3LI72 72 aa3.69□□□□□ -1.82
HCG20-207ENST00000422944 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
HCG20-207ENST00000422944 MT1EP04732 61 aa3.67□□□□□ -1.82
HCG20-207ENST00000422944 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
HCG20-207ENST00000422944 SPRR2EP22531 72 aa3.62□□□□□ -1.83
HCG20-207ENST00000422944 SPRR2BP35325 72 aa3.62□□□□□ -1.83
HCG20-207ENST00000422944 SPRR2AP35326 72 aa3.62□□□□□ -1.83
HCG20-207ENST00000422944 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
HCG20-207ENST00000422944 KRTAP19-3Q7Z4W3 81 aa3.59□□□□□ -1.83
HCG20-207ENST00000422944 MDN1Q9NU22 5596 aa3.58□□□□□ -1.84
HCG20-207ENST00000422944 MT1GP13640 62 aa3.58□□□□□ -1.84
HCG20-207ENST00000422944 MT1LQ93083 61 aa3.56□□□□□ -1.84
HCG20-207ENST00000422944 NEBP20929 6669 aa3.52□□□□□ -1.85
HCG20-207ENST00000422944 SPRR2DP22532 72 aa3.51□□□□□ -1.85
HCG20-207ENST00000422944 MT1MQ8N339 61 aa3.46□□□□□ -1.86
HCG20-207ENST00000422944 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
HCG20-207ENST00000422944 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
HCG20-207ENST00000422944 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
HCG20-207ENST00000422944 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.87
HCG20-207ENST00000422944 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
HCG20-207ENST00000422944 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
HCG20-207ENST00000422944 INE1O15225 51 aa3.33□□□□□ -1.88
HCG20-207ENST00000422944 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
HCG20-207ENST00000422944 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
HCG20-207ENST00000422944 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
HCG20-207ENST00000422944 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
HCG20-207ENST00000422944 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
HCG20-207ENST00000422944 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
HCG20-207ENST00000422944 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
HCG20-207ENST00000422944 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
HCG20-207ENST00000422944 MT1AP04731 61 aa3.06□□□□□ -1.92
HCG20-207ENST00000422944 MT3P25713 68 aa3.06□□□□□ -1.92
HCG20-207ENST00000422944 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
HCG20-207ENST00000422944 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
HCG20-207ENST00000422944 MT4P47944 62 aa3.01□□□□□ -1.93
HCG20-207ENST00000422944 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
HCG20-207ENST00000422944 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
HCG20-207ENST00000422944 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
HCG20-207ENST00000422944 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
HCG20-207ENST00000422944 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
HCG20-207ENST00000422944 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
HCG20-207ENST00000422944 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
HCG20-207ENST00000422944 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
HCG20-207ENST00000422944 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
HCG20-207ENST00000422944 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
HCG20-207ENST00000422944 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
HCG20-207ENST00000422944 GPR98Q8WXG9 6306 aa2.59□□□□□ -2
HCG20-207ENST00000422944 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
HCG20-207ENST00000422944 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
HCG20-207ENST00000422944 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
HCG20-207ENST00000422944 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
HCG20-207ENST00000422944 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
HCG20-207ENST00000422944 MUC5ACP98088 5654 aa2.34□□□□□ -2.03
HCG20-207ENST00000422944 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
HCG20-207ENST00000422944 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
HCG20-207ENST00000422944 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
HCG20-207ENST00000422944 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
HCG20-207ENST00000422944 PRM1P04553 51 aa2.03□□□□□ -2.08
HCG20-207ENST00000422944 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
HCG20-207ENST00000422944 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
HCG20-207ENST00000422944 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
HCG20-207ENST00000422944 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
HCG20-207ENST00000422944 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 53.2 ms