RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 SPRR2DP22532 72 aa3.7□□□□□ -1.82
HERC3-204ENST00000422770 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
HERC3-204ENST00000422770 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
HERC3-204ENST00000422770 LCE3AQ5TA76 89 aa3.65□□□□□ -1.83
HERC3-204ENST00000422770 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
HERC3-204ENST00000422770 MT1EP04732 61 aa3.58□□□□□ -1.84
HERC3-204ENST00000422770 KRTAP19-5Q3LI72 72 aa3.58□□□□□ -1.84
HERC3-204ENST00000422770 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
HERC3-204ENST00000422770 KTN1-AS1Q86SY8 53 aa3.57□□□□□ -1.84
HERC3-204ENST00000422770 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
HERC3-204ENST00000422770 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
HERC3-204ENST00000422770 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
HERC3-204ENST00000422770 KRTAP23-1A1A580 65 aa3.51□□□□□ -1.85
HERC3-204ENST00000422770 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
HERC3-204ENST00000422770 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
HERC3-204ENST00000422770 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
HERC3-204ENST00000422770 MT1GP13640 62 aa3.45□□□□□ -1.86
HERC3-204ENST00000422770 MT1LQ93083 61 aa3.44□□□□□ -1.86
HERC3-204ENST00000422770 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
HERC3-204ENST00000422770 MT1MQ8N339 61 aa3.41□□□□□ -1.86
HERC3-204ENST00000422770 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
HERC3-204ENST00000422770 KRTAP15-1Q3LI76 137 aa3.35□□□□□ -1.87
HERC3-204ENST00000422770 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
HERC3-204ENST00000422770 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
HERC3-204ENST00000422770 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
HERC3-204ENST00000422770 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
HERC3-204ENST00000422770 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
HERC3-204ENST00000422770 MT4P47944 62 aa3.24□□□□□ -1.89
HERC3-204ENST00000422770 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
HERC3-204ENST00000422770 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
HERC3-204ENST00000422770 KRTAP19-4Q3LI73 84 aa3.17□□□□□ -1.9
HERC3-204ENST00000422770 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.9
HERC3-204ENST00000422770 LOC100996750A0A140TA64 210 aa3.15□□□□□ -1.91
HERC3-204ENST00000422770 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
HERC3-204ENST00000422770 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
HERC3-204ENST00000422770 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
HERC3-204ENST00000422770 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
HERC3-204ENST00000422770 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
HERC3-204ENST00000422770 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
HERC3-204ENST00000422770 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
HERC3-204ENST00000422770 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
HERC3-204ENST00000422770 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
HERC3-204ENST00000422770 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
HERC3-204ENST00000422770 MT1AP04731 61 aa2.93□□□□□ -1.94
HERC3-204ENST00000422770 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
HERC3-204ENST00000422770 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
HERC3-204ENST00000422770 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.95
HERC3-204ENST00000422770 KRTAP9-4Q9BYQ2 154 aa2.81□□□□□ -1.96
HERC3-204ENST00000422770 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
HERC3-204ENST00000422770 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
HERC3-204ENST00000422770 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
HERC3-204ENST00000422770 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
HERC3-204ENST00000422770 MT3P25713 68 aa2.68□□□□□ -1.98
HERC3-204ENST00000422770 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
HERC3-204ENST00000422770 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
HERC3-204ENST00000422770 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
HERC3-204ENST00000422770 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.99
HERC3-204ENST00000422770 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.99
HERC3-204ENST00000422770 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
HERC3-204ENST00000422770 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
HERC3-204ENST00000422770 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
HERC3-204ENST00000422770 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
HERC3-204ENST00000422770 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
HERC3-204ENST00000422770 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
HERC3-204ENST00000422770 INE1O15225 51 aa2.37□□□□□ -2.03
HERC3-204ENST00000422770 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
HERC3-204ENST00000422770 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
HERC3-204ENST00000422770 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
HERC3-204ENST00000422770 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
HERC3-204ENST00000422770 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
HERC3-204ENST00000422770 PRM1P04553 51 aa1.98□□□□□ -2.09
HERC3-204ENST00000422770 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
HERC3-204ENST00000422770 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
HERC3-204ENST00000422770 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
HERC3-204ENST00000422770 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
HERC3-204ENST00000422770 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
HERC3-204ENST00000422770 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
HERC3-204ENST00000422770 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 73.8 ms