RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 PRR15LQ9BU68 103 aa4.59□□□□□ -1.67
UFD1-203ENST00000421968 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
UFD1-203ENST00000421968 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
UFD1-203ENST00000421968 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
UFD1-203ENST00000421968 A0A1B0GU69 56 aa4.54□□□□□ -1.68
UFD1-203ENST00000421968 AHNAKQ09666 5890 aaKnown RBP4.52□□□□□ -1.69
UFD1-203ENST00000421968 ADM2Q7Z4H4 148 aa4.47□□□□□ -1.69
UFD1-203ENST00000421968 M0QZ58 72 aa4.45□□□□□ -1.7
UFD1-203ENST00000421968 A0A1B0GU33 70 aa4.43□□□□□ -1.7
UFD1-203ENST00000421968 UQCR11O14957 56 aa4.43□□□□□ -1.7
UFD1-203ENST00000421968 MT1EP04732 61 aa4.43□□□□□ -1.7
UFD1-203ENST00000421968 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
UFD1-203ENST00000421968 PSPHP1O15172 72 aa4.41□□□□□ -1.7
UFD1-203ENST00000421968 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
UFD1-203ENST00000421968 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
UFD1-203ENST00000421968 P0C880 135 aa4.39□□□□□ -1.71
UFD1-203ENST00000421968 R4GN34 69 aa4.38□□□□□ -1.71
UFD1-203ENST00000421968 MT1GP13640 62 aa4.36□□□□□ -1.71
UFD1-203ENST00000421968 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
UFD1-203ENST00000421968 PP632Q6XCG6 107 aa4.35□□□□□ -1.71
UFD1-203ENST00000421968 A6NED7 52 aa4.34□□□□□ -1.71
UFD1-203ENST00000421968 SPATA8Q6RVD6 105 aa4.33□□□□□ -1.72
UFD1-203ENST00000421968 MIR22HGQ0VDD5 57 aa4.32□□□□□ -1.72
UFD1-203ENST00000421968 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
UFD1-203ENST00000421968 MT1MQ8N339 61 aa4.28□□□□□ -1.72
UFD1-203ENST00000421968 LINC01554Q52M75 96 aa4.27□□□□□ -1.73
UFD1-203ENST00000421968 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
UFD1-203ENST00000421968 K7ERS5 55 aa4.24□□□□□ -1.73
UFD1-203ENST00000421968 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
UFD1-203ENST00000421968 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
UFD1-203ENST00000421968 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
UFD1-203ENST00000421968 A0A0D9SG42 100 aa4.16□□□□□ -1.74
UFD1-203ENST00000421968 A8MU10 97 aa4.16□□□□□ -1.74
UFD1-203ENST00000421968 KRTAP12-1P59990 96 aa4.15□□□□□ -1.75
UFD1-203ENST00000421968 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
UFD1-203ENST00000421968 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
UFD1-203ENST00000421968 SPINT4Q6UDR6 99 aa4.12□□□□□ -1.75
UFD1-203ENST00000421968 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
UFD1-203ENST00000421968 MT1LQ93083 61 aa4.09□□□□□ -1.75
UFD1-203ENST00000421968 CAMK2N1Q7Z7J9 78 aa4.07□□□□□ -1.76
UFD1-203ENST00000421968 PMAIP1Q13794 54 aa4.01□□□□□ -1.77
UFD1-203ENST00000421968 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
UFD1-203ENST00000421968 ROMO1P60602 79 aa3.97□□□□□ -1.77
UFD1-203ENST00000421968 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
UFD1-203ENST00000421968 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
UFD1-203ENST00000421968 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
UFD1-203ENST00000421968 TNP1P09430 55 aa3.91□□□□□ -1.78
UFD1-203ENST00000421968 C10orf95Q9H7T3 257 aa3.91□□□□□ -1.78
UFD1-203ENST00000421968 MT3P25713 68 aa3.87□□□□□ -1.79
UFD1-203ENST00000421968 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
UFD1-203ENST00000421968 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
UFD1-203ENST00000421968 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
UFD1-203ENST00000421968 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
UFD1-203ENST00000421968 LCE3AQ5TA76 89 aa3.64□□□□□ -1.83
UFD1-203ENST00000421968 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
UFD1-203ENST00000421968 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
UFD1-203ENST00000421968 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
UFD1-203ENST00000421968 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
UFD1-203ENST00000421968 MT1AP04731 61 aa3.46□□□□□ -1.86
UFD1-203ENST00000421968 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
UFD1-203ENST00000421968 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
UFD1-203ENST00000421968 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
UFD1-203ENST00000421968 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
UFD1-203ENST00000421968 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
UFD1-203ENST00000421968 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
UFD1-203ENST00000421968 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
UFD1-203ENST00000421968 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
UFD1-203ENST00000421968 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
UFD1-203ENST00000421968 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
UFD1-203ENST00000421968 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
UFD1-203ENST00000421968 INE1O15225 51 aa2.53□□□□□ -2
UFD1-203ENST00000421968 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
UFD1-203ENST00000421968 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
UFD1-203ENST00000421968 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
UFD1-203ENST00000421968 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
UFD1-203ENST00000421968 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
UFD1-203ENST00000421968 PRM1P04553 51 aa2□□□□□ -2.09
UFD1-203ENST00000421968 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 39.1 ms