RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 GPR98Q8WXG9 6306 aa6.37□□□□□ -1.39
MSH6-203ENST00000420813 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
MSH6-203ENST00000420813 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
MSH6-203ENST00000420813 PMAIP1Q13794 54 aa6.36□□□□□ -1.39
MSH6-203ENST00000420813 SPINT4Q6UDR6 99 aa6.33□□□□□ -1.4
MSH6-203ENST00000420813 MT1GP13640 62 aa6.32□□□□□ -1.4
MSH6-203ENST00000420813 KRTAP19-5Q3LI72 72 aa6.29□□□□□ -1.4
MSH6-203ENST00000420813 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
MSH6-203ENST00000420813 PP632Q6XCG6 107 aa6.27□□□□□ -1.41
MSH6-203ENST00000420813 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
MSH6-203ENST00000420813 LCE1DQ5T752 114 aa6.23□□□□□ -1.41
MSH6-203ENST00000420813 LCE4AQ5TA78 99 aa6.19□□□□□ -1.42
MSH6-203ENST00000420813 MT1MQ8N339 61 aa6.19□□□□□ -1.42
MSH6-203ENST00000420813 KTN1-AS1Q86SY8 53 aa6.16□□□□□ -1.42
MSH6-203ENST00000420813 MT1LQ93083 61 aa6.16□□□□□ -1.42
MSH6-203ENST00000420813 ROMO1P60602 79 aa6.15□□□□□ -1.42
MSH6-203ENST00000420813 HMCN1Q96RW7 5635 aa6.11□□□□□ -1.43
MSH6-203ENST00000420813 MT4P47944 62 aa6.11□□□□□ -1.43
MSH6-203ENST00000420813 H3BS24 57 aa6.1□□□□□ -1.43
MSH6-203ENST00000420813 C10orf95Q9H7T3 257 aa6.06□□□□□ -1.44
MSH6-203ENST00000420813 LCE3AQ5TA76 89 aa6.05□□□□□ -1.44
MSH6-203ENST00000420813 SVIPQ8NHG7 77 aa6.05□□□□□ -1.44
MSH6-203ENST00000420813 TNP1P09430 55 aa6.04□□□□□ -1.44
MSH6-203ENST00000420813 KRTAP5-4Q6L8H1 288 aa6.04□□□□□ -1.44
MSH6-203ENST00000420813 KRTAP4-3Q9BYR4 195 aa6.02□□□□□ -1.45
MSH6-203ENST00000420813 AHNAK2Q8IVF2 5795 aa5.95□□□□□ -1.46
MSH6-203ENST00000420813 PRAC1Q96KF2 57 aa5.95□□□□□ -1.46
MSH6-203ENST00000420813 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
MSH6-203ENST00000420813 KRTAP5-10Q6L8G5 202 aa5.9□□□□□ -1.46
MSH6-203ENST00000420813 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
MSH6-203ENST00000420813 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
MSH6-203ENST00000420813 KRTAP5-3Q6L8H2 238 aa5.72□□□□□ -1.49
MSH6-203ENST00000420813 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
MSH6-203ENST00000420813 KRTAP5-7Q6L8G8 165 aa5.71□□□□□ -1.5
MSH6-203ENST00000420813 KRTAP5-5Q701N2 237 aaPredicted RBP5.71□□□□□ -1.5
MSH6-203ENST00000420813 KRTAP4-12Q9BQ66 201 aa5.71□□□□□ -1.5
MSH6-203ENST00000420813 KRTAP20-2Q3LI61 65 aa5.7□□□□□ -1.5
MSH6-203ENST00000420813 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
MSH6-203ENST00000420813 KRTAP12-4P60329 112 aa5.61□□□□□ -1.51
MSH6-203ENST00000420813 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
MSH6-203ENST00000420813 KRTAP9-9Q9BYP9 154 aa5.47□□□□□ -1.53
MSH6-203ENST00000420813 KRTAP9-4Q9BYQ2 154 aa5.47□□□□□ -1.53
MSH6-203ENST00000420813 SYNE1Q8NF91 8797 aaKnown RBP5.46□□□□□ -1.53
MSH6-203ENST00000420813 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
MSH6-203ENST00000420813 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
MSH6-203ENST00000420813 KRTAP5-2Q701N4 177 aa5.26□□□□□ -1.57
MSH6-203ENST00000420813 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
MSH6-203ENST00000420813 MT1AP04731 61 aa5.25□□□□□ -1.57
MSH6-203ENST00000420813 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
MSH6-203ENST00000420813 KRTAP5-8O75690 187 aa5.08□□□□□ -1.6
MSH6-203ENST00000420813 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
MSH6-203ENST00000420813 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
MSH6-203ENST00000420813 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
MSH6-203ENST00000420813 MUC5BQ9HC84 5762 aaPredicted RBP4.93□□□□□ -1.62
MSH6-203ENST00000420813 MUC5ACP98088 5654 aa4.92□□□□□ -1.62
MSH6-203ENST00000420813 AHNAKQ09666 5890 aaKnown RBP4.91□□□□□ -1.62
MSH6-203ENST00000420813 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
MSH6-203ENST00000420813 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
MSH6-203ENST00000420813 MT3P25713 68 aa4.82□□□□□ -1.64
MSH6-203ENST00000420813 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
MSH6-203ENST00000420813 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
MSH6-203ENST00000420813 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
MSH6-203ENST00000420813 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
MSH6-203ENST00000420813 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
MSH6-203ENST00000420813 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
MSH6-203ENST00000420813 INE1O15225 51 aa3.97□□□□□ -1.77
MSH6-203ENST00000420813 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
MSH6-203ENST00000420813 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
MSH6-203ENST00000420813 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
MSH6-203ENST00000420813 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
MSH6-203ENST00000420813 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
MSH6-203ENST00000420813 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
MSH6-203ENST00000420813 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
MSH6-203ENST00000420813 PRM1P04553 51 aa3.19□□□□□ -1.9
MSH6-203ENST00000420813 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
MSH6-203ENST00000420813 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
MSH6-203ENST00000420813 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
MSH6-203ENST00000420813 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 60 ms