RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
PRAME-207ENST00000420709 SMIM26A0A096LP01 95 aa4.65□□□□□ -1.67
PRAME-207ENST00000420709 PRR15LQ9BU68 103 aa4.65□□□□□ -1.67
PRAME-207ENST00000420709 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
PRAME-207ENST00000420709 LINC01558Q9Y6Z2 57 aa4.64□□□□□ -1.67
PRAME-207ENST00000420709 MT4P47944 62 aa4.63□□□□□ -1.67
PRAME-207ENST00000420709 KRTAP12-1P59990 96 aa4.62□□□□□ -1.67
PRAME-207ENST00000420709 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
PRAME-207ENST00000420709 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
PRAME-207ENST00000420709 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
PRAME-207ENST00000420709 Q1T7F1 81 aa4.6□□□□□ -1.67
PRAME-207ENST00000420709 MT1MQ8N339 61 aa4.59□□□□□ -1.67
PRAME-207ENST00000420709 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
PRAME-207ENST00000420709 A8MU10 97 aa4.58□□□□□ -1.68
PRAME-207ENST00000420709 MT1LQ93083 61 aa4.56□□□□□ -1.68
PRAME-207ENST00000420709 V9GYY9 64 aa4.56□□□□□ -1.68
PRAME-207ENST00000420709 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
PRAME-207ENST00000420709 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
PRAME-207ENST00000420709 UQCR11O14957 56 aa4.5□□□□□ -1.69
PRAME-207ENST00000420709 PSPHP1O15172 72 aa4.5□□□□□ -1.69
PRAME-207ENST00000420709 LCE3AQ5TA76 89 aa4.48□□□□□ -1.69
PRAME-207ENST00000420709 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
PRAME-207ENST00000420709 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
PRAME-207ENST00000420709 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
PRAME-207ENST00000420709 MIR22HGQ0VDD5 57 aa4.4□□□□□ -1.71
PRAME-207ENST00000420709 SVIPQ8NHG7 77 aa4.4□□□□□ -1.71
PRAME-207ENST00000420709 TNP1P09430 55 aa4.39□□□□□ -1.71
PRAME-207ENST00000420709 A6NED7 52 aa4.35□□□□□ -1.71
PRAME-207ENST00000420709 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
PRAME-207ENST00000420709 K7ERS5 55 aa4.32□□□□□ -1.72
PRAME-207ENST00000420709 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
PRAME-207ENST00000420709 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
PRAME-207ENST00000420709 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
PRAME-207ENST00000420709 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
PRAME-207ENST00000420709 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
PRAME-207ENST00000420709 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
PRAME-207ENST00000420709 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
PRAME-207ENST00000420709 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
PRAME-207ENST00000420709 BRK1Q8WUW1 75 aa4.2□□□□□ -1.74
PRAME-207ENST00000420709 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
PRAME-207ENST00000420709 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
PRAME-207ENST00000420709 PRO0628Q9UI54 55 aa4.04□□□□□ -1.76
PRAME-207ENST00000420709 ROMO1P60602 79 aa4.03□□□□□ -1.76
PRAME-207ENST00000420709 PMAIP1Q13794 54 aa3.94□□□□□ -1.78
PRAME-207ENST00000420709 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
PRAME-207ENST00000420709 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
PRAME-207ENST00000420709 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
PRAME-207ENST00000420709 MT1AP04731 61 aa3.86□□□□□ -1.79
PRAME-207ENST00000420709 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
PRAME-207ENST00000420709 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
PRAME-207ENST00000420709 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
PRAME-207ENST00000420709 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
PRAME-207ENST00000420709 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
PRAME-207ENST00000420709 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
PRAME-207ENST00000420709 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
PRAME-207ENST00000420709 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
PRAME-207ENST00000420709 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
PRAME-207ENST00000420709 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
PRAME-207ENST00000420709 MT3P25713 68 aa3.54□□□□□ -1.84
PRAME-207ENST00000420709 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
PRAME-207ENST00000420709 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
PRAME-207ENST00000420709 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
PRAME-207ENST00000420709 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
PRAME-207ENST00000420709 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
PRAME-207ENST00000420709 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
PRAME-207ENST00000420709 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
PRAME-207ENST00000420709 LUZP6Q538Z0 58 aa3□□□□□ -1.93
PRAME-207ENST00000420709 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
PRAME-207ENST00000420709 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
PRAME-207ENST00000420709 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
PRAME-207ENST00000420709 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
PRAME-207ENST00000420709 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
PRAME-207ENST00000420709 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
PRAME-207ENST00000420709 INE1O15225 51 aa2.36□□□□□ -2.03
PRAME-207ENST00000420709 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
PRAME-207ENST00000420709 PRM1P04553 51 aa2.08□□□□□ -2.08
PRAME-207ENST00000420709 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
PRAME-207ENST00000420709 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 66.9 ms