RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
TNFAIP3-202ENST00000420009 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
TNFAIP3-202ENST00000420009 CHKB-CPT1BH3BT56 60 aa3.83□□□□□ -1.8
TNFAIP3-202ENST00000420009 MT1EP04732 61 aa3.83□□□□□ -1.8
TNFAIP3-202ENST00000420009 SMIM26A0A096LP01 95 aa3.81□□□□□ -1.8
TNFAIP3-202ENST00000420009 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
TNFAIP3-202ENST00000420009 MT4P47944 62 aa3.79□□□□□ -1.8
TNFAIP3-202ENST00000420009 Q1T7F1 81 aa3.76□□□□□ -1.81
TNFAIP3-202ENST00000420009 SPTSSBQ8NFR3 76 aa3.75□□□□□ -1.81
TNFAIP3-202ENST00000420009 LINC01558Q9Y6Z2 57 aa3.75□□□□□ -1.81
TNFAIP3-202ENST00000420009 MT1GP13640 62 aa3.72□□□□□ -1.81
TNFAIP3-202ENST00000420009 V9GYY9 64 aa3.72□□□□□ -1.81
TNFAIP3-202ENST00000420009 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
TNFAIP3-202ENST00000420009 PRR15LQ9BU68 103 aa3.7□□□□□ -1.82
TNFAIP3-202ENST00000420009 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
TNFAIP3-202ENST00000420009 PSPHP1O15172 72 aa3.68□□□□□ -1.82
TNFAIP3-202ENST00000420009 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
TNFAIP3-202ENST00000420009 A0A1B0GU69 56 aa3.67□□□□□ -1.82
TNFAIP3-202ENST00000420009 CAMK2N1Q7Z7J9 78 aa3.66□□□□□ -1.82
TNFAIP3-202ENST00000420009 MT1MQ8N339 61 aa3.66□□□□□ -1.82
TNFAIP3-202ENST00000420009 MT3P25713 68 aa3.64□□□□□ -1.83
TNFAIP3-202ENST00000420009 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
TNFAIP3-202ENST00000420009 SEC61GP60059 68 aa3.63□□□□□ -1.83
TNFAIP3-202ENST00000420009 KRTAP13-4Q3LI77 160 aa3.62□□□□□ -1.83
TNFAIP3-202ENST00000420009 MT1LQ93083 61 aa3.6□□□□□ -1.83
TNFAIP3-202ENST00000420009 A0A0D9SG42 100 aa3.59□□□□□ -1.83
TNFAIP3-202ENST00000420009 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
TNFAIP3-202ENST00000420009 A0A1B0GU33 70 aa3.58□□□□□ -1.84
TNFAIP3-202ENST00000420009 A6NED7 52 aa3.56□□□□□ -1.84
TNFAIP3-202ENST00000420009 UQCR11O14957 56 aa3.55□□□□□ -1.84
TNFAIP3-202ENST00000420009 A8MU10 97 aa3.53□□□□□ -1.84
TNFAIP3-202ENST00000420009 SPATA8Q6RVD6 105 aa3.53□□□□□ -1.84
TNFAIP3-202ENST00000420009 MIR22HGQ0VDD5 57 aa3.52□□□□□ -1.85
TNFAIP3-202ENST00000420009 CDC42SE1Q9NRR8 79 aa3.51□□□□□ -1.85
TNFAIP3-202ENST00000420009 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
TNFAIP3-202ENST00000420009 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
TNFAIP3-202ENST00000420009 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
TNFAIP3-202ENST00000420009 BRK1Q8WUW1 75 aa3.49□□□□□ -1.85
TNFAIP3-202ENST00000420009 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
TNFAIP3-202ENST00000420009 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
TNFAIP3-202ENST00000420009 KRTAP12-1P59990 96 aa3.42□□□□□ -1.86
TNFAIP3-202ENST00000420009 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
TNFAIP3-202ENST00000420009 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.86
TNFAIP3-202ENST00000420009 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
TNFAIP3-202ENST00000420009 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
TNFAIP3-202ENST00000420009 SPINT4Q6UDR6 99 aa3.39□□□□□ -1.87
TNFAIP3-202ENST00000420009 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
TNFAIP3-202ENST00000420009 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
TNFAIP3-202ENST00000420009 K7ERS5 55 aa3.32□□□□□ -1.88
TNFAIP3-202ENST00000420009 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
TNFAIP3-202ENST00000420009 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
TNFAIP3-202ENST00000420009 TNP1P09430 55 aa3.29□□□□□ -1.88
TNFAIP3-202ENST00000420009 PMAIP1Q13794 54 aa3.28□□□□□ -1.88
TNFAIP3-202ENST00000420009 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
TNFAIP3-202ENST00000420009 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
TNFAIP3-202ENST00000420009 ROMO1P60602 79 aa3.23□□□□□ -1.89
TNFAIP3-202ENST00000420009 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
TNFAIP3-202ENST00000420009 KTN1-AS1Q86SY8 53 aa3.17□□□□□ -1.9
TNFAIP3-202ENST00000420009 PRAC1Q96KF2 57 aa3.13□□□□□ -1.91
TNFAIP3-202ENST00000420009 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
TNFAIP3-202ENST00000420009 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
TNFAIP3-202ENST00000420009 MT1AP04731 61 aa3.06□□□□□ -1.92
TNFAIP3-202ENST00000420009 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
TNFAIP3-202ENST00000420009 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
TNFAIP3-202ENST00000420009 A0A0A0MQY5 61 aa2.95□□□□□ -1.94
TNFAIP3-202ENST00000420009 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
TNFAIP3-202ENST00000420009 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
TNFAIP3-202ENST00000420009 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
TNFAIP3-202ENST00000420009 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
TNFAIP3-202ENST00000420009 NDUFAF8A1L188 74 aa2.44□□□□□ -2.02
TNFAIP3-202ENST00000420009 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
TNFAIP3-202ENST00000420009 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
TNFAIP3-202ENST00000420009 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
TNFAIP3-202ENST00000420009 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
TNFAIP3-202ENST00000420009 INE1O15225 51 aa2□□□□□ -2.09
TNFAIP3-202ENST00000420009 PRM1P04553 51 aa1.7□□□□□ -2.14
TNFAIP3-202ENST00000420009 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
TNFAIP3-202ENST00000420009 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 8.1 ms