RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 LCE5AQ5TCM9 118 aa6.43□□□□□ -1.38
EPCAM-203ENST00000419334 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
EPCAM-203ENST00000419334 GPR98Q8WXG9 6306 aa6.38□□□□□ -1.39
EPCAM-203ENST00000419334 LCE3BQ5TA77 95 aa6.35□□□□□ -1.39
EPCAM-203ENST00000419334 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
EPCAM-203ENST00000419334 MT1GP13640 62 aa6.33□□□□□ -1.4
EPCAM-203ENST00000419334 MT1LQ93083 61 aa6.31□□□□□ -1.4
EPCAM-203ENST00000419334 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
EPCAM-203ENST00000419334 PP632Q6XCG6 107 aa6.27□□□□□ -1.41
EPCAM-203ENST00000419334 MT1MQ8N339 61 aa6.22□□□□□ -1.41
EPCAM-203ENST00000419334 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.42
EPCAM-203ENST00000419334 ROMO1P60602 79 aa6.19□□□□□ -1.42
EPCAM-203ENST00000419334 DSTQ03001 7570 aaKnown RBP6.14□□□□□ -1.43
EPCAM-203ENST00000419334 KRTAP4-3Q9BYR4 195 aa6.04□□□□□ -1.44
EPCAM-203ENST00000419334 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
EPCAM-203ENST00000419334 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
EPCAM-203ENST00000419334 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.46
EPCAM-203ENST00000419334 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
EPCAM-203ENST00000419334 BRK1Q8WUW1 75 aa5.93□□□□□ -1.46
EPCAM-203ENST00000419334 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
EPCAM-203ENST00000419334 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
EPCAM-203ENST00000419334 HMCN1Q96RW7 5635 aa5.8□□□□□ -1.48
EPCAM-203ENST00000419334 LCE1DQ5T752 114 aa5.78□□□□□ -1.48
EPCAM-203ENST00000419334 KRTAP5-4Q6L8H1 288 aa5.78□□□□□ -1.48
EPCAM-203ENST00000419334 MT4P47944 62 aa5.69□□□□□ -1.5
EPCAM-203ENST00000419334 KRTAP5-5Q701N2 237 aaPredicted RBP5.69□□□□□ -1.5
EPCAM-203ENST00000419334 AHNAK2Q8IVF2 5795 aa5.69□□□□□ -1.5
EPCAM-203ENST00000419334 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
EPCAM-203ENST00000419334 KRTAP5-10Q6L8G5 202 aa5.61□□□□□ -1.51
EPCAM-203ENST00000419334 PMAIP1Q13794 54 aa5.59□□□□□ -1.51
EPCAM-203ENST00000419334 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
EPCAM-203ENST00000419334 KRTAP5-7Q6L8G8 165 aa5.48□□□□□ -1.53
EPCAM-203ENST00000419334 KRTAP9-6A8MVA2 160 aa5.46□□□□□ -1.54
EPCAM-203ENST00000419334 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
EPCAM-203ENST00000419334 SPRR5A0A1B0GTR4 108 aa5.44□□□□□ -1.54
EPCAM-203ENST00000419334 KRTAP20-2Q3LI61 65 aa5.42□□□□□ -1.54
EPCAM-203ENST00000419334 PRO0628Q9UI54 55 aa5.41□□□□□ -1.54
EPCAM-203ENST00000419334 MT1AP04731 61 aa5.38□□□□□ -1.55
EPCAM-203ENST00000419334 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
EPCAM-203ENST00000419334 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.56
EPCAM-203ENST00000419334 KRTAP6-1Q3LI64 71 aa5.32□□□□□ -1.56
EPCAM-203ENST00000419334 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
EPCAM-203ENST00000419334 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
EPCAM-203ENST00000419334 KRTAP5-2Q701N4 177 aa5.12□□□□□ -1.59
EPCAM-203ENST00000419334 KTN1-AS1Q86SY8 53 aa5.12□□□□□ -1.59
EPCAM-203ENST00000419334 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
EPCAM-203ENST00000419334 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
EPCAM-203ENST00000419334 MT3P25713 68 aa4.9□□□□□ -1.63
EPCAM-203ENST00000419334 AHNAKQ09666 5890 aaKnown RBP4.89□□□□□ -1.63
EPCAM-203ENST00000419334 KRTAP4-11Q9BYQ6 195 aa4.88□□□□□ -1.63
EPCAM-203ENST00000419334 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
EPCAM-203ENST00000419334 MUC5BQ9HC84 5762 aaPredicted RBP4.8□□□□□ -1.64
EPCAM-203ENST00000419334 KRTAP5-8O75690 187 aa4.72□□□□□ -1.65
EPCAM-203ENST00000419334 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
EPCAM-203ENST00000419334 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
EPCAM-203ENST00000419334 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
EPCAM-203ENST00000419334 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
EPCAM-203ENST00000419334 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
EPCAM-203ENST00000419334 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
EPCAM-203ENST00000419334 H3BS24 57 aa4.22□□□□□ -1.73
EPCAM-203ENST00000419334 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
EPCAM-203ENST00000419334 LCE1CQ5T751 118 aa4.13□□□□□ -1.75
EPCAM-203ENST00000419334 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
EPCAM-203ENST00000419334 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
EPCAM-203ENST00000419334 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
EPCAM-203ENST00000419334 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
EPCAM-203ENST00000419334 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
EPCAM-203ENST00000419334 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
EPCAM-203ENST00000419334 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
EPCAM-203ENST00000419334 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
EPCAM-203ENST00000419334 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
EPCAM-203ENST00000419334 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
EPCAM-203ENST00000419334 PRM1P04553 51 aa3.18□□□□□ -1.9
EPCAM-203ENST00000419334 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
EPCAM-203ENST00000419334 INE1O15225 51 aa3.13□□□□□ -1.91
EPCAM-203ENST00000419334 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
EPCAM-203ENST00000419334 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
EPCAM-203ENST00000419334 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 160 ms