RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 KRTAP10-10P60014 251 aa1.8□□□□□ -2.12
GPCPD1-202ENST00000418646 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
GPCPD1-202ENST00000418646 INE1O15225 51 aa1.78□□□□□ -2.12
GPCPD1-202ENST00000418646 DSTQ03001 7570 aaKnown RBP1.78□□□□□ -2.12
GPCPD1-202ENST00000418646 USH2AO75445 5202 aa1.76□□□□□ -2.13
GPCPD1-202ENST00000418646 SYNE2Q8WXH0 6885 aaKnown RBP1.76□□□□□ -2.13
GPCPD1-202ENST00000418646 LCE3AQ5TA76 89 aa1.75□□□□□ -2.13
GPCPD1-202ENST00000418646 LCE5AQ5TCM9 118 aa1.75□□□□□ -2.13
GPCPD1-202ENST00000418646 TNP1P09430 55 aa1.75□□□□□ -2.13
GPCPD1-202ENST00000418646 KRTAP5-3Q6L8H2 238 aa1.74□□□□□ -2.13
GPCPD1-202ENST00000418646 MACF1Q9UPN3 7388 aaKnown RBP1.74□□□□□ -2.13
GPCPD1-202ENST00000418646 KRTAP6-3Q3LI67 103 aa1.73□□□□□ -2.13
GPCPD1-202ENST00000418646 KMT2DO14686 5537 aa1.73□□□□□ -2.13
GPCPD1-202ENST00000418646 KRTAP19-4Q3LI73 84 aa1.72□□□□□ -2.13
GPCPD1-202ENST00000418646 KRTAP10-7P60409 375 aaPredicted RBP1.71□□□□□ -2.14
GPCPD1-202ENST00000418646 GPR98Q8WXG9 6306 aa1.71□□□□□ -2.14
GPCPD1-202ENST00000418646 KRTAP19-6Q3LI70 58 aa1.7□□□□□ -2.14
GPCPD1-202ENST00000418646 NEBP20929 6669 aa1.69□□□□□ -2.14
GPCPD1-202ENST00000418646 KRTAP2-3P0C7H8 128 aa1.69□□□□□ -2.14
GPCPD1-202ENST00000418646 KRTAP2-4Q9BYR9 128 aa1.69□□□□□ -2.14
GPCPD1-202ENST00000418646 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
GPCPD1-202ENST00000418646 KRTAP19-5Q3LI72 72 aa1.68□□□□□ -2.14
GPCPD1-202ENST00000418646 KRTAP19-7Q3SYF9 63 aa1.68□□□□□ -2.14
GPCPD1-202ENST00000418646 KRTAP9-6A8MVA2 160 aa1.67□□□□□ -2.14
GPCPD1-202ENST00000418646 KRTAP5-9P26371 169 aa1.67□□□□□ -2.14
GPCPD1-202ENST00000418646 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
GPCPD1-202ENST00000418646 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
GPCPD1-202ENST00000418646 KRTAP20-1Q3LI63 56 aa1.64□□□□□ -2.15
GPCPD1-202ENST00000418646 LCE3CQ5T5A8 94 aa1.63□□□□□ -2.15
GPCPD1-202ENST00000418646 OBSCNQ5VST9 7968 aa1.62□□□□□ -2.15
GPCPD1-202ENST00000418646 MT1EP04732 61 aa1.59□□□□□ -2.16
GPCPD1-202ENST00000418646 MT1LQ93083 61 aa1.58□□□□□ -2.16
GPCPD1-202ENST00000418646 KRTAP2-2Q9BYT5 123 aa1.57□□□□□ -2.16
GPCPD1-202ENST00000418646 MDN1Q9NU22 5596 aa1.53□□□□□ -2.16
GPCPD1-202ENST00000418646 SYNE1Q8NF91 8797 aaKnown RBP1.52□□□□□ -2.17
GPCPD1-202ENST00000418646 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
GPCPD1-202ENST00000418646 SPRR2FQ96RM1 72 aa1.51□□□□□ -2.17
GPCPD1-202ENST00000418646 SPRR2EP22531 72 aa1.5□□□□□ -2.17
GPCPD1-202ENST00000418646 SPRR2BP35325 72 aa1.5□□□□□ -2.17
GPCPD1-202ENST00000418646 SPRR2AP35326 72 aa1.5□□□□□ -2.17
GPCPD1-202ENST00000418646 KRTAP5-5Q701N2 237 aaPredicted RBP1.5□□□□□ -2.17
GPCPD1-202ENST00000418646 SPRR2DP22532 72 aa1.45□□□□□ -2.18
GPCPD1-202ENST00000418646 MT1MQ8N339 61 aa1.45□□□□□ -2.18
GPCPD1-202ENST00000418646 MUC12Q9UKN1 5478 aa1.45□□□□□ -2.18
GPCPD1-202ENST00000418646 LCE1AQ5T7P2 110 aa1.44□□□□□ -2.18
GPCPD1-202ENST00000418646 KRTAP19-3Q7Z4W3 81 aa1.43□□□□□ -2.18
GPCPD1-202ENST00000418646 MT1AP04731 61 aa1.43□□□□□ -2.18
GPCPD1-202ENST00000418646 MT1GP13640 62 aa1.42□□□□□ -2.18
GPCPD1-202ENST00000418646 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
GPCPD1-202ENST00000418646 MT3P25713 68 aa1.4□□□□□ -2.19
GPCPD1-202ENST00000418646 KRTAP5-10Q6L8G5 202 aa1.39□□□□□ -2.19
GPCPD1-202ENST00000418646 KRTAP4-3Q9BYR4 195 aa1.37□□□□□ -2.19
GPCPD1-202ENST00000418646 KRTAP5-4Q6L8H1 288 aa1.35□□□□□ -2.19
GPCPD1-202ENST00000418646 MT4P47944 62 aa1.34□□□□□ -2.2
GPCPD1-202ENST00000418646 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
GPCPD1-202ENST00000418646 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
GPCPD1-202ENST00000418646 KRTAP6-1Q3LI64 71 aa1.31□□□□□ -2.2
GPCPD1-202ENST00000418646 KRTAP5-11Q6L8G4 156 aa1.3□□□□□ -2.2
GPCPD1-202ENST00000418646 KRTAP5-2Q701N4 177 aa1.26□□□□□ -2.21
GPCPD1-202ENST00000418646 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
GPCPD1-202ENST00000418646 LCE1FQ5T754 118 aa1.24□□□□□ -2.21
GPCPD1-202ENST00000418646 KRTAP12-4P60329 112 aa1.24□□□□□ -2.21
GPCPD1-202ENST00000418646 LCE1EQ5T753 118 aa1.19□□□□□ -2.22
GPCPD1-202ENST00000418646 KRTAP5-8O75690 187 aa1.16□□□□□ -2.22
GPCPD1-202ENST00000418646 LCE3EQ5T5B0 92 aa1.16□□□□□ -2.22
GPCPD1-202ENST00000418646 LCE3DQ9BYE3 92 aa1.16□□□□□ -2.22
GPCPD1-202ENST00000418646 MUC5ACP98088 5654 aa1.14□□□□□ -2.23
GPCPD1-202ENST00000418646 KRTAP6-2Q3LI66 62 aa1.12□□□□□ -2.23
GPCPD1-202ENST00000418646 KRTAP5-1Q6L8H4 278 aa1.12□□□□□ -2.23
GPCPD1-202ENST00000418646 KRTAP20-2Q3LI61 65 aa1.12□□□□□ -2.23
GPCPD1-202ENST00000418646 PRM1P04553 51 aa1.09□□□□□ -2.23
GPCPD1-202ENST00000418646 KRTAP4-4Q9BYR3 166 aa1.08□□□□□ -2.24
GPCPD1-202ENST00000418646 LCE1BQ5T7P3 118 aa1.03□□□□□ -2.24
GPCPD1-202ENST00000418646 LCE1CQ5T751 118 aa1□□□□□ -2.25
GPCPD1-202ENST00000418646 KRTAP21-2Q3LI59 83 aa0.95□□□□□ -2.26
GPCPD1-202ENST00000418646 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
GPCPD1-202ENST00000418646 PHGR1C9JFL3 82 aa0.84□□□□□ -2.28
GPCPD1-202ENST00000418646 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 125.5 ms