RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 SPRR2DP22532 72 aa5.23□□□□□ -1.57
HLA-DMB-258ENST00000418107 PP632Q6XCG6 107 aa5.2□□□□□ -1.58
HLA-DMB-258ENST00000418107 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
HLA-DMB-258ENST00000418107 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
HLA-DMB-258ENST00000418107 GPR98Q8WXG9 6306 aa5.17□□□□□ -1.58
HLA-DMB-258ENST00000418107 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
HLA-DMB-258ENST00000418107 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
HLA-DMB-258ENST00000418107 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
HLA-DMB-258ENST00000418107 KRTAP4-8Q9BYQ9 185 aa5.13□□□□□ -1.59
HLA-DMB-258ENST00000418107 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
HLA-DMB-258ENST00000418107 DSTQ03001 7570 aaKnown RBP5□□□□□ -1.61
HLA-DMB-258ENST00000418107 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
HLA-DMB-258ENST00000418107 KRTAP19-5Q3LI72 72 aa4.91□□□□□ -1.62
HLA-DMB-258ENST00000418107 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
HLA-DMB-258ENST00000418107 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
HLA-DMB-258ENST00000418107 KRTAP19-7Q3SYF9 63 aa4.79□□□□□ -1.64
HLA-DMB-258ENST00000418107 MT1EP04732 61 aa4.75□□□□□ -1.65
HLA-DMB-258ENST00000418107 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
HLA-DMB-258ENST00000418107 HMCN1Q96RW7 5635 aa4.7□□□□□ -1.66
HLA-DMB-258ENST00000418107 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
HLA-DMB-258ENST00000418107 AHNAK2Q8IVF2 5795 aa4.69□□□□□ -1.66
HLA-DMB-258ENST00000418107 KRTAP19-3Q7Z4W3 81 aa4.67□□□□□ -1.66
HLA-DMB-258ENST00000418107 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.67
HLA-DMB-258ENST00000418107 MT1LQ93083 61 aa4.65□□□□□ -1.67
HLA-DMB-258ENST00000418107 KRTAP4-6Q9BYQ5 205 aa4.65□□□□□ -1.67
HLA-DMB-258ENST00000418107 MT4P47944 62 aa4.61□□□□□ -1.67
HLA-DMB-258ENST00000418107 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
HLA-DMB-258ENST00000418107 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
HLA-DMB-258ENST00000418107 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
HLA-DMB-258ENST00000418107 MT1GP13640 62 aa4.54□□□□□ -1.68
HLA-DMB-258ENST00000418107 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.69
HLA-DMB-258ENST00000418107 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
HLA-DMB-258ENST00000418107 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
HLA-DMB-258ENST00000418107 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
HLA-DMB-258ENST00000418107 MT1MQ8N339 61 aa4.48□□□□□ -1.69
HLA-DMB-258ENST00000418107 KRTAP5-4Q6L8H1 288 aa4.43□□□□□ -1.7
HLA-DMB-258ENST00000418107 KRTAP4-3Q9BYR4 195 aa4.4□□□□□ -1.71
HLA-DMB-258ENST00000418107 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
HLA-DMB-258ENST00000418107 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
HLA-DMB-258ENST00000418107 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
HLA-DMB-258ENST00000418107 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
HLA-DMB-258ENST00000418107 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
HLA-DMB-258ENST00000418107 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.75
HLA-DMB-258ENST00000418107 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
HLA-DMB-258ENST00000418107 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
HLA-DMB-258ENST00000418107 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
HLA-DMB-258ENST00000418107 MT1AP04731 61 aa3.96□□□□□ -1.78
HLA-DMB-258ENST00000418107 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
HLA-DMB-258ENST00000418107 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
HLA-DMB-258ENST00000418107 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
HLA-DMB-258ENST00000418107 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
HLA-DMB-258ENST00000418107 KRTAP9-9Q9BYP9 154 aa3.89□□□□□ -1.79
HLA-DMB-258ENST00000418107 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
HLA-DMB-258ENST00000418107 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
HLA-DMB-258ENST00000418107 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
HLA-DMB-258ENST00000418107 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
HLA-DMB-258ENST00000418107 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
HLA-DMB-258ENST00000418107 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
HLA-DMB-258ENST00000418107 MT3P25713 68 aa3.62□□□□□ -1.83
HLA-DMB-258ENST00000418107 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
HLA-DMB-258ENST00000418107 INE1O15225 51 aa3.56□□□□□ -1.84
HLA-DMB-258ENST00000418107 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
HLA-DMB-258ENST00000418107 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
HLA-DMB-258ENST00000418107 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
HLA-DMB-258ENST00000418107 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
HLA-DMB-258ENST00000418107 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.92
HLA-DMB-258ENST00000418107 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
HLA-DMB-258ENST00000418107 PRM1P04553 51 aa2.93□□□□□ -1.94
HLA-DMB-258ENST00000418107 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
HLA-DMB-258ENST00000418107 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
HLA-DMB-258ENST00000418107 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
HLA-DMB-258ENST00000418107 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
HLA-DMB-258ENST00000418107 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
HLA-DMB-258ENST00000418107 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
HLA-DMB-258ENST00000418107 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.04
HLA-DMB-258ENST00000418107 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
HLA-DMB-258ENST00000418107 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 41.9 ms