RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 KRTAP19-4Q3LI73 84 aa6.6□□□□□ -1.35
COMMD3-BMI1-201ENST00000417470 KRTAP19-7Q3SYF9 63 aa6.58□□□□□ -1.36
COMMD3-BMI1-201ENST00000417470 KRTAP4-11Q9BYQ6 195 aa6.51□□□□□ -1.37
COMMD3-BMI1-201ENST00000417470 MT1EP04732 61 aa6.5□□□□□ -1.37
COMMD3-BMI1-201ENST00000417470 KRTAP20-1Q3LI63 56 aa6.48□□□□□ -1.37
COMMD3-BMI1-201ENST00000417470 LCE3AQ5TA76 89 aa6.47□□□□□ -1.37
COMMD3-BMI1-201ENST00000417470 KRTAP25-1Q3LHN0 102 aa6.46□□□□□ -1.38
COMMD3-BMI1-201ENST00000417470 KRTAP19-5Q3LI72 72 aa6.46□□□□□ -1.38
COMMD3-BMI1-201ENST00000417470 CDC42SE1Q9NRR8 79 aa6.46□□□□□ -1.38
COMMD3-BMI1-201ENST00000417470 KRTAP2-3P0C7H8 128 aa6.44□□□□□ -1.38
COMMD3-BMI1-201ENST00000417470 KRTAP2-4Q9BYR9 128 aa6.44□□□□□ -1.38
COMMD3-BMI1-201ENST00000417470 SPRR2DP22532 72 aa6.42□□□□□ -1.38
COMMD3-BMI1-201ENST00000417470 LCE5AQ5TCM9 118 aa6.39□□□□□ -1.39
COMMD3-BMI1-201ENST00000417470 KRTAP19-3Q7Z4W3 81 aa6.39□□□□□ -1.39
COMMD3-BMI1-201ENST00000417470 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
COMMD3-BMI1-201ENST00000417470 MT1GP13640 62 aa6.3□□□□□ -1.4
COMMD3-BMI1-201ENST00000417470 ROMO1P60602 79 aa6.26□□□□□ -1.41
COMMD3-BMI1-201ENST00000417470 MT1LQ93083 61 aa6.26□□□□□ -1.41
COMMD3-BMI1-201ENST00000417470 KRTAP2-2Q9BYT5 123 aa6.26□□□□□ -1.41
COMMD3-BMI1-201ENST00000417470 KRTAP2-1Q9BYU5 128 aa6.26□□□□□ -1.41
COMMD3-BMI1-201ENST00000417470 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
COMMD3-BMI1-201ENST00000417470 H3BS24 57 aa6.23□□□□□ -1.41
COMMD3-BMI1-201ENST00000417470 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
COMMD3-BMI1-201ENST00000417470 MT1MQ8N339 61 aa6.16□□□□□ -1.42
COMMD3-BMI1-201ENST00000417470 DSTQ03001 7570 aaKnown RBP6.12□□□□□ -1.43
COMMD3-BMI1-201ENST00000417470 BRK1Q8WUW1 75 aa6.03□□□□□ -1.44
COMMD3-BMI1-201ENST00000417470 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
COMMD3-BMI1-201ENST00000417470 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
COMMD3-BMI1-201ENST00000417470 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
COMMD3-BMI1-201ENST00000417470 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
COMMD3-BMI1-201ENST00000417470 KRTAP5-4Q6L8H1 288 aa5.73□□□□□ -1.49
COMMD3-BMI1-201ENST00000417470 PMAIP1Q13794 54 aa5.72□□□□□ -1.49
COMMD3-BMI1-201ENST00000417470 KRTAP5-5Q701N2 237 aaPredicted RBP5.65□□□□□ -1.5
COMMD3-BMI1-201ENST00000417470 PRO0628Q9UI54 55 aa5.59□□□□□ -1.51
COMMD3-BMI1-201ENST00000417470 HMCN1Q96RW7 5635 aa5.58□□□□□ -1.52
COMMD3-BMI1-201ENST00000417470 MT4P47944 62 aa5.56□□□□□ -1.52
COMMD3-BMI1-201ENST00000417470 SYNE1Q8NF91 8797 aaKnown RBP5.44□□□□□ -1.54
COMMD3-BMI1-201ENST00000417470 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
COMMD3-BMI1-201ENST00000417470 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.54
COMMD3-BMI1-201ENST00000417470 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
COMMD3-BMI1-201ENST00000417470 PRAC1Q96KF2 57 aa5.38□□□□□ -1.55
COMMD3-BMI1-201ENST00000417470 MT1AP04731 61 aa5.35□□□□□ -1.55
COMMD3-BMI1-201ENST00000417470 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
COMMD3-BMI1-201ENST00000417470 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
COMMD3-BMI1-201ENST00000417470 KTN1-AS1Q86SY8 53 aa5.26□□□□□ -1.57
COMMD3-BMI1-201ENST00000417470 GPR98Q8WXG9 6306 aa5.25□□□□□ -1.57
COMMD3-BMI1-201ENST00000417470 AHNAK2Q8IVF2 5795 aa5.23□□□□□ -1.57
COMMD3-BMI1-201ENST00000417470 KRTAP5-10Q6L8G5 202 aa5.08□□□□□ -1.6
COMMD3-BMI1-201ENST00000417470 KRTAP5-2Q701N4 177 aa5.08□□□□□ -1.6
COMMD3-BMI1-201ENST00000417470 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
COMMD3-BMI1-201ENST00000417470 SVIPQ8NHG7 77 aa4.92□□□□□ -1.62
COMMD3-BMI1-201ENST00000417470 MT3P25713 68 aa4.88□□□□□ -1.63
COMMD3-BMI1-201ENST00000417470 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
COMMD3-BMI1-201ENST00000417470 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
COMMD3-BMI1-201ENST00000417470 KRTAP5-8O75690 187 aa4.64□□□□□ -1.67
COMMD3-BMI1-201ENST00000417470 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
COMMD3-BMI1-201ENST00000417470 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
COMMD3-BMI1-201ENST00000417470 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
COMMD3-BMI1-201ENST00000417470 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
COMMD3-BMI1-201ENST00000417470 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
COMMD3-BMI1-201ENST00000417470 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
COMMD3-BMI1-201ENST00000417470 MUC5BQ9HC84 5762 aaPredicted RBP4.3□□□□□ -1.72
COMMD3-BMI1-201ENST00000417470 LCE3DQ9BYE3 92 aa4.25□□□□□ -1.73
COMMD3-BMI1-201ENST00000417470 AHNAKQ09666 5890 aaKnown RBP4.22□□□□□ -1.73
COMMD3-BMI1-201ENST00000417470 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
COMMD3-BMI1-201ENST00000417470 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
COMMD3-BMI1-201ENST00000417470 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
COMMD3-BMI1-201ENST00000417470 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
COMMD3-BMI1-201ENST00000417470 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
COMMD3-BMI1-201ENST00000417470 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
COMMD3-BMI1-201ENST00000417470 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
COMMD3-BMI1-201ENST00000417470 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
COMMD3-BMI1-201ENST00000417470 INE1O15225 51 aa3.27□□□□□ -1.89
COMMD3-BMI1-201ENST00000417470 PRM1P04553 51 aa3.19□□□□□ -1.9
COMMD3-BMI1-201ENST00000417470 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
COMMD3-BMI1-201ENST00000417470 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
COMMD3-BMI1-201ENST00000417470 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
COMMD3-BMI1-201ENST00000417470 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 52.8 ms