RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 LCE3BQ5TA77 95 aa8.49□□□□□ -1.05
SMARCB1-205ENST00000417137 CDC42SE1Q9NRR8 79 aa8.43□□□□□ -1.06
SMARCB1-205ENST00000417137 KRTAP19-3Q7Z4W3 81 aa8.41□□□□□ -1.06
SMARCB1-205ENST00000417137 LCE5AQ5TCM9 118 aa8.37□□□□□ -1.07
SMARCB1-205ENST00000417137 GPR98Q8WXG9 6306 aa8.33□□□□□ -1.08
SMARCB1-205ENST00000417137 MT1GP13640 62 aa8.3□□□□□ -1.08
SMARCB1-205ENST00000417137 PP632Q6XCG6 107 aa8.26□□□□□ -1.09
SMARCB1-205ENST00000417137 LOC100996750A0A140TA64 210 aa8.25□□□□□ -1.09
SMARCB1-205ENST00000417137 KRTAP12-3P60328 96 aa8.25□□□□□ -1.09
SMARCB1-205ENST00000417137 KRTAP4-6Q9BYQ5 205 aa8.25□□□□□ -1.09
SMARCB1-205ENST00000417137 MT1LQ93083 61 aa8.24□□□□□ -1.09
SMARCB1-205ENST00000417137 ROMO1P60602 79 aa8.23□□□□□ -1.09
SMARCB1-205ENST00000417137 KRTAP23-1A1A580 65 aa8.21□□□□□ -1.1
SMARCB1-205ENST00000417137 DSTQ03001 7570 aaKnown RBP8.17□□□□□ -1.1
SMARCB1-205ENST00000417137 MT1MQ8N339 61 aa8.1□□□□□ -1.11
SMARCB1-205ENST00000417137 KRTAP4-9Q9BYQ8 210 aa8□□□□□ -1.13
SMARCB1-205ENST00000417137 BRK1Q8WUW1 75 aa7.94□□□□□ -1.14
SMARCB1-205ENST00000417137 KRTAP19-4Q3LI73 84 aa7.9□□□□□ -1.14
SMARCB1-205ENST00000417137 KRTAP4-3Q9BYR4 195 aa7.86□□□□□ -1.15
SMARCB1-205ENST00000417137 KRTAP15-1Q3LI76 137 aa7.85□□□□□ -1.15
SMARCB1-205ENST00000417137 KRTAP4-7Q9BYR0 210 aa7.82□□□□□ -1.16
SMARCB1-205ENST00000417137 LCE1DQ5T752 114 aa7.78□□□□□ -1.16
SMARCB1-205ENST00000417137 LCE4AQ5TA78 99 aa7.68□□□□□ -1.18
SMARCB1-205ENST00000417137 HMCN1Q96RW7 5635 aa7.66□□□□□ -1.18
SMARCB1-205ENST00000417137 LCE3CQ5T5A8 94 aa7.63□□□□□ -1.19
SMARCB1-205ENST00000417137 MT4P47944 62 aa7.61□□□□□ -1.19
SMARCB1-205ENST00000417137 AHNAK2Q8IVF2 5795 aa7.53□□□□□ -1.2
SMARCB1-205ENST00000417137 PMAIP1Q13794 54 aa7.52□□□□□ -1.21
SMARCB1-205ENST00000417137 KRTAP5-4Q6L8H1 288 aa7.5□□□□□ -1.21
SMARCB1-205ENST00000417137 KRTAP5-10Q6L8G5 202 aa7.49□□□□□ -1.21
SMARCB1-205ENST00000417137 KRTAP5-5Q701N2 237 aaPredicted RBP7.37□□□□□ -1.23
SMARCB1-205ENST00000417137 KRTAP5-7Q6L8G8 165 aa7.3□□□□□ -1.24
SMARCB1-205ENST00000417137 PRO0628Q9UI54 55 aa7.27□□□□□ -1.25
SMARCB1-205ENST00000417137 KRTAP5-3Q6L8H2 238 aa7.21□□□□□ -1.26
SMARCB1-205ENST00000417137 KRTAP4-12Q9BQ66 201 aa7.21□□□□□ -1.26
SMARCB1-205ENST00000417137 KRTAP12-4P60329 112 aa7.18□□□□□ -1.26
SMARCB1-205ENST00000417137 KRTAP9-6A8MVA2 160 aa7.11□□□□□ -1.27
SMARCB1-205ENST00000417137 SPRR5A0A1B0GTR4 108 aa7.1□□□□□ -1.27
SMARCB1-205ENST00000417137 PRAC1Q96KF2 57 aa7.07□□□□□ -1.28
SMARCB1-205ENST00000417137 KRTAP20-2Q3LI61 65 aa7.05□□□□□ -1.28
SMARCB1-205ENST00000417137 MT1AP04731 61 aa7.03□□□□□ -1.28
SMARCB1-205ENST00000417137 KRTAP9-9Q9BYP9 154 aa7.02□□□□□ -1.29
SMARCB1-205ENST00000417137 KRTAP9-4Q9BYQ2 154 aa7.02□□□□□ -1.29
SMARCB1-205ENST00000417137 SYNE1Q8NF91 8797 aaKnown RBP7□□□□□ -1.29
SMARCB1-205ENST00000417137 KRTAP6-1Q3LI64 71 aa6.93□□□□□ -1.3
SMARCB1-205ENST00000417137 KTN1-AS1Q86SY8 53 aa6.86□□□□□ -1.31
SMARCB1-205ENST00000417137 KRTAP5-2Q701N4 177 aa6.63□□□□□ -1.35
SMARCB1-205ENST00000417137 KRTAP6-2Q3LI66 62 aa6.56□□□□□ -1.36
SMARCB1-205ENST00000417137 SVIPQ8NHG7 77 aa6.55□□□□□ -1.36
SMARCB1-205ENST00000417137 KRTAP4-11Q9BYQ6 195 aa6.55□□□□□ -1.36
SMARCB1-205ENST00000417137 MT3P25713 68 aa6.45□□□□□ -1.38
SMARCB1-205ENST00000417137 KRTAP4-2Q9BYR5 136 aa6.41□□□□□ -1.38
SMARCB1-205ENST00000417137 AHNAKQ09666 5890 aaKnown RBP6.39□□□□□ -1.39
SMARCB1-205ENST00000417137 MUC5ACP98088 5654 aa6.36□□□□□ -1.39
SMARCB1-205ENST00000417137 KRTAP5-8O75690 187 aa6.32□□□□□ -1.4
SMARCB1-205ENST00000417137 MUC5BQ9HC84 5762 aaPredicted RBP6.31□□□□□ -1.4
SMARCB1-205ENST00000417137 OBSCNQ5VST9 7968 aa6.16□□□□□ -1.42
SMARCB1-205ENST00000417137 LUZP6Q538Z0 58 aa6.04□□□□□ -1.44
SMARCB1-205ENST00000417137 H3BS24 57 aa6□□□□□ -1.45
SMARCB1-205ENST00000417137 KRTAP5-1Q6L8H4 278 aa5.87□□□□□ -1.47
SMARCB1-205ENST00000417137 LCE1EQ5T753 118 aa5.83□□□□□ -1.48
SMARCB1-205ENST00000417137 LCE3DQ9BYE3 92 aa5.6□□□□□ -1.51
SMARCB1-205ENST00000417137 LCE1BQ5T7P3 118 aa5.44□□□□□ -1.54
SMARCB1-205ENST00000417137 LCE1CQ5T751 118 aa5.39□□□□□ -1.55
SMARCB1-205ENST00000417137 LCE3EQ5T5B0 92 aa5.34□□□□□ -1.55
SMARCB1-205ENST00000417137 NDUFAF8A1L188 74 aa5.14□□□□□ -1.59
SMARCB1-205ENST00000417137 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.94□□□□□ -1.62
SMARCB1-205ENST00000417137 KRTAP5-11Q6L8G4 156 aa4.83□□□□□ -1.64
SMARCB1-205ENST00000417137 LCE1FQ5T754 118 aa4.65□□□□□ -1.67
SMARCB1-205ENST00000417137 KRTAP21-2Q3LI59 83 aa4.56□□□□□ -1.68
SMARCB1-205ENST00000417137 PHGR1C9JFL3 82 aa4.4□□□□□ -1.71
SMARCB1-205ENST00000417137 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
SMARCB1-205ENST00000417137 INE1O15225 51 aa4.25□□□□□ -1.73
SMARCB1-205ENST00000417137 PRM1P04553 51 aa4.2□□□□□ -1.74
SMARCB1-205ENST00000417137 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
SMARCB1-205ENST00000417137 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
SMARCB1-205ENST00000417137 KRTAP21-1Q3LI58 79 aa3.38□□□□□ -1.87
SMARCB1-205ENST00000417137 MUC16Q8WXI7 14507 aa2.71□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 179.1 ms