RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 TENM3Q9P273 2699 aa0.6□□□□□ -2.31
CTDSPL-203ENST00000416688 RNF213Q63HN8 5207 aa0.6□□□□□ -2.31
CTDSPL-203ENST00000416688 HMCN2Q8NDA2 5059 aa0.59□□□□□ -2.31
CTDSPL-203ENST00000416688 UNC80Q8N2C7 3258 aa0.59□□□□□ -2.31
CTDSPL-203ENST00000416688 MGAM2Q2M2H8 2515 aa0.59□□□□□ -2.31
CTDSPL-203ENST00000416688 SPEGQ15772 3267 aa0.59□□□□□ -2.32
CTDSPL-203ENST00000416688 NBEAL1Q6ZS30 2694 aa0.59□□□□□ -2.32
CTDSPL-203ENST00000416688 CFAP46Q8IYW2 2715 aa0.58□□□□□ -2.32
CTDSPL-203ENST00000416688 SVEP1Q4LDE5 3571 aa0.58□□□□□ -2.32
CTDSPL-203ENST00000416688 LOC400499M0QZD8 3231 aa0.58□□□□□ -2.32
CTDSPL-203ENST00000416688 CENPFP49454 3210 aa0.58□□□□□ -2.32
CTDSPL-203ENST00000416688 SMR3BP02814 79 aaPredicted RBP0.58□□□□□ -2.32
CTDSPL-203ENST00000416688 KRTAP20-1Q3LI63 56 aa0.58□□□□□ -2.32
CTDSPL-203ENST00000416688 LINC01556Q5JQF7 62 aa0.58□□□□□ -2.32
CTDSPL-203ENST00000416688 FLNAP21333 2647 aaKnown RBP0.58□□□□□ -2.32
CTDSPL-203ENST00000416688 BRCA2P51587 3418 aa0.57□□□□□ -2.32
CTDSPL-203ENST00000416688 ITPR2Q14571 2701 aa0.57□□□□□ -2.32
CTDSPL-203ENST00000416688 MAP1AP78559 2803 aaPredicted RBP0.57□□□□□ -2.32
CTDSPL-203ENST00000416688 MYO9AB2RTY4 2548 aa0.57□□□□□ -2.32
CTDSPL-203ENST00000416688 LAMA1P25391 3075 aa0.56□□□□□ -2.32
CTDSPL-203ENST00000416688 EP400Q96L91 3159 aa0.56□□□□□ -2.32
CTDSPL-203ENST00000416688 SPTAN1Q13813 2472 aaKnown RBP0.56□□□□□ -2.32
CTDSPL-203ENST00000416688 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
CTDSPL-203ENST00000416688 KRTAP4-1Q9BYQ7 146 aa0.56□□□□□ -2.32
CTDSPL-203ENST00000416688 TRRAPQ9Y4A5 3859 aa0.55□□□□□ -2.32
CTDSPL-203ENST00000416688 VPS13AQ96RL7 3174 aa0.55□□□□□ -2.32
CTDSPL-203ENST00000416688 DEFB4AO15263 64 aa0.55□□□□□ -2.32
CTDSPL-203ENST00000416688 KRTAP19-5Q3LI72 72 aa0.55□□□□□ -2.32
CTDSPL-203ENST00000416688 FAT1Q14517 4588 aa0.55□□□□□ -2.32
CTDSPL-203ENST00000416688 ASPMQ8IZT6 3477 aa0.54□□□□□ -2.32
CTDSPL-203ENST00000416688 PKHD1P08F94 4074 aa0.54□□□□□ -2.32
CTDSPL-203ENST00000416688 HTN3P15516 51 aa0.54□□□□□ -2.32
CTDSPL-203ENST00000416688 SPRR2EP22531 72 aa0.54□□□□□ -2.32
CTDSPL-203ENST00000416688 SPRR2FQ96RM1 72 aa0.54□□□□□ -2.32
CTDSPL-203ENST00000416688 CSMD2Q7Z408 3487 aa0.54□□□□□ -2.32
CTDSPL-203ENST00000416688 DNAH17Q9UFH2 4485 aa0.54□□□□□ -2.32
CTDSPL-203ENST00000416688 TLN1Q9Y490 2541 aaKnown RBP0.54□□□□□ -2.32
CTDSPL-203ENST00000416688 GOLGB1Q14789 3259 aaKnown RBP0.53□□□□□ -2.32
CTDSPL-203ENST00000416688 LRP1BQ9NZR2 4599 aa0.52□□□□□ -2.33
CTDSPL-203ENST00000416688 KRTAP5-10Q6L8G5 202 aa0.52□□□□□ -2.33
CTDSPL-203ENST00000416688 PLECQ15149 4684 aaKnown RBP0.52□□□□□ -2.33
CTDSPL-203ENST00000416688 USH2AO75445 5202 aa0.52□□□□□ -2.33
CTDSPL-203ENST00000416688 FCGBPQ9Y6R7 5405 aaPredicted RBP0.51□□□□□ -2.33
CTDSPL-203ENST00000416688 VPS13CQ709C8 3753 aa0.51□□□□□ -2.33
CTDSPL-203ENST00000416688 UTRNP46939 3433 aa0.51□□□□□ -2.33
CTDSPL-203ENST00000416688 MUC12Q9UKN1 5478 aa0.51□□□□□ -2.33
CTDSPL-203ENST00000416688 CEP295Q9C0D2 2601 aa0.51□□□□□ -2.33
CTDSPL-203ENST00000416688 STAB2Q8WWQ8 2551 aa0.5□□□□□ -2.33
CTDSPL-203ENST00000416688 CENPEQ02224 2701 aa0.49□□□□□ -2.33
CTDSPL-203ENST00000416688 DYNC1H1Q14204 4646 aaKnown RBP0.46□□□□□ -2.34
CTDSPL-203ENST00000416688 MUC17Q685J3 4493 aa0.45□□□□□ -2.34
CTDSPL-203ENST00000416688 DNAH14Q0VDD8 3507 aa0.44□□□□□ -2.34
CTDSPL-203ENST00000416688 DNAH5Q8TE73 4624 aa0.44□□□□□ -2.34
CTDSPL-203ENST00000416688 MT1EP04732 61 aa0.43□□□□□ -2.34
CTDSPL-203ENST00000416688 CDH23Q9H251 3354 aa0.43□□□□□ -2.34
CTDSPL-203ENST00000416688 MT1HP80294 61 aa0.42□□□□□ -2.34
CTDSPL-203ENST00000416688 WDFY3Q8IZQ1 3526 aa0.42□□□□□ -2.34
CTDSPL-203ENST00000416688 MYO15AQ9UKN7 3530 aa0.41□□□□□ -2.34
CTDSPL-203ENST00000416688 LRP2P98164 4655 aa0.39□□□□□ -2.35
CTDSPL-203ENST00000416688 MT1LQ93083 61 aa0.39□□□□□ -2.35
CTDSPL-203ENST00000416688 KRTAP19-2Q3LHN2 52 aa0.37□□□□□ -2.35
CTDSPL-203ENST00000416688 SPRR2GQ9BYE4 73 aa0.36□□□□□ -2.35
CTDSPL-203ENST00000416688 MT1XP80297 61 aa0.35□□□□□ -2.35
CTDSPL-203ENST00000416688 MUC16Q8WXI7 14507 aa0.35□□□□□ -2.35
CTDSPL-203ENST00000416688 STARD9Q9P2P6 4700 aa0.34□□□□□ -2.36
CTDSPL-203ENST00000416688 KRTAP19-8Q3LI54 63 aa0.33□□□□□ -2.36
CTDSPL-203ENST00000416688 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
CTDSPL-203ENST00000416688 MT1BP07438 61 aa0.31□□□□□ -2.36
CTDSPL-203ENST00000416688 KRTAP19-7Q3SYF9 63 aa0.31□□□□□ -2.36
CTDSPL-203ENST00000416688 MT1HL1P0DM35 61 aa0.29□□□□□ -2.36
CTDSPL-203ENST00000416688 MT1GP13640 62 aa0.28□□□□□ -2.36
CTDSPL-203ENST00000416688 MT2AP02795 61 aa0.27□□□□□ -2.37
CTDSPL-203ENST00000416688 MT1FP04733 61 aa0.27□□□□□ -2.37
CTDSPL-203ENST00000416688 KRTAP6-1Q3LI64 71 aa0.26□□□□□ -2.37
CTDSPL-203ENST00000416688 MT1MQ8N339 61 aa0.25□□□□□ -2.37
CTDSPL-203ENST00000416688 KRTAP19-6Q3LI70 58 aa0.18□□□□□ -2.38
CTDSPL-203ENST00000416688 MT4P47944 62 aa0.12□□□□□ -2.39
CTDSPL-203ENST00000416688 KRTAP20-2Q3LI61 65 aa0.08□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 98.8 ms