RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 KRTAP2-1Q9BYU5 128 aa2.35□□□□□ -2.03
CLIP4-205ENST00000415891 KRTAP10-4P60372 401 aaPredicted RBP2.32□□□□□ -2.04
CLIP4-205ENST00000415891 LPAP08519 4548 aa2.32□□□□□ -2.04
CLIP4-205ENST00000415891 MT1HL1P0DM35 61 aa2.31□□□□□ -2.04
CLIP4-205ENST00000415891 KRTAP10-5P60370 271 aa2.29□□□□□ -2.04
CLIP4-205ENST00000415891 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
CLIP4-205ENST00000415891 M0R2T5 61 aa2.29□□□□□ -2.04
CLIP4-205ENST00000415891 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
CLIP4-205ENST00000415891 LCE3AQ5TA76 89 aa2.28□□□□□ -2.04
CLIP4-205ENST00000415891 CRCT1Q9UGL9 99 aa2.27□□□□□ -2.05
CLIP4-205ENST00000415891 KRTAP8-1Q8IUC2 63 aa2.25□□□□□ -2.05
CLIP4-205ENST00000415891 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
CLIP4-205ENST00000415891 FSIP2Q5CZC0 6907 aa2.2□□□□□ -2.06
CLIP4-205ENST00000415891 KRTAP5-9P26371 169 aa2.2□□□□□ -2.06
CLIP4-205ENST00000415891 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
CLIP4-205ENST00000415891 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
CLIP4-205ENST00000415891 MUC17Q685J3 4493 aa2.17□□□□□ -2.06
CLIP4-205ENST00000415891 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
CLIP4-205ENST00000415891 KRTAP5-4Q6L8H1 288 aa2.11□□□□□ -2.07
CLIP4-205ENST00000415891 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
CLIP4-205ENST00000415891 KRTAP19-2Q3LHN2 52 aa2.06□□□□□ -2.08
CLIP4-205ENST00000415891 SSPOA2VEC9 5147 aa2.06□□□□□ -2.08
CLIP4-205ENST00000415891 KRTAP9-6A8MVA2 160 aa2.05□□□□□ -2.08
CLIP4-205ENST00000415891 PRM1P04553 51 aa2.05□□□□□ -2.08
CLIP4-205ENST00000415891 USH2AO75445 5202 aa2.03□□□□□ -2.08
CLIP4-205ENST00000415891 SPRR2GQ9BYE4 73 aa2.01□□□□□ -2.09
CLIP4-205ENST00000415891 FCGBPQ9Y6R7 5405 aaPredicted RBP2.01□□□□□ -2.09
CLIP4-205ENST00000415891 KRTAP4-1Q9BYQ7 146 aa2□□□□□ -2.09
CLIP4-205ENST00000415891 MT1HP80294 61 aa1.98□□□□□ -2.09
CLIP4-205ENST00000415891 KRTAP20-1Q3LI63 56 aa1.98□□□□□ -2.09
CLIP4-205ENST00000415891 SYNE2Q8WXH0 6885 aaKnown RBP1.97□□□□□ -2.09
CLIP4-205ENST00000415891 NEBP20929 6669 aa1.95□□□□□ -2.1
CLIP4-205ENST00000415891 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
CLIP4-205ENST00000415891 MACF1Q9UPN3 7388 aaKnown RBP1.94□□□□□ -2.1
CLIP4-205ENST00000415891 MT1XP80297 61 aa1.91□□□□□ -2.1
CLIP4-205ENST00000415891 KRTAP5-5Q701N2 237 aaPredicted RBP1.89□□□□□ -2.11
CLIP4-205ENST00000415891 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
CLIP4-205ENST00000415891 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
CLIP4-205ENST00000415891 KRTAP19-8Q3LI54 63 aa1.84□□□□□ -2.11
CLIP4-205ENST00000415891 KRTAP19-6Q3LI70 58 aa1.83□□□□□ -2.12
CLIP4-205ENST00000415891 KRTAP4-3Q9BYR4 195 aa1.82□□□□□ -2.12
CLIP4-205ENST00000415891 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
CLIP4-205ENST00000415891 MT1BP07438 61 aa1.8□□□□□ -2.12
CLIP4-205ENST00000415891 SYNE1Q8NF91 8797 aaKnown RBP1.79□□□□□ -2.12
CLIP4-205ENST00000415891 MT2AP02795 61 aa1.78□□□□□ -2.12
CLIP4-205ENST00000415891 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
CLIP4-205ENST00000415891 MT1FP04733 61 aa1.77□□□□□ -2.13
CLIP4-205ENST00000415891 MT1AP04731 61 aa1.76□□□□□ -2.13
CLIP4-205ENST00000415891 KMT2DO14686 5537 aa1.76□□□□□ -2.13
CLIP4-205ENST00000415891 OBSCNQ5VST9 7968 aa1.75□□□□□ -2.13
CLIP4-205ENST00000415891 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
CLIP4-205ENST00000415891 KRTAP19-7Q3SYF9 63 aa1.7□□□□□ -2.14
CLIP4-205ENST00000415891 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
CLIP4-205ENST00000415891 LCE1BQ5T7P3 118 aa1.7□□□□□ -2.14
CLIP4-205ENST00000415891 MT1LQ93083 61 aa1.69□□□□□ -2.14
CLIP4-205ENST00000415891 MT1EP04732 61 aa1.66□□□□□ -2.14
CLIP4-205ENST00000415891 KRTAP19-3Q7Z4W3 81 aa1.66□□□□□ -2.14
CLIP4-205ENST00000415891 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.14
CLIP4-205ENST00000415891 AHNAK2Q8IVF2 5795 aa1.65□□□□□ -2.15
CLIP4-205ENST00000415891 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
CLIP4-205ENST00000415891 SPRR2EP22531 72 aa1.63□□□□□ -2.15
CLIP4-205ENST00000415891 SPRR2BP35325 72 aa1.63□□□□□ -2.15
CLIP4-205ENST00000415891 SPRR2AP35326 72 aa1.63□□□□□ -2.15
CLIP4-205ENST00000415891 SPRR2DP22532 72 aa1.61□□□□□ -2.15
CLIP4-205ENST00000415891 MT1GP13640 62 aa1.6□□□□□ -2.15
CLIP4-205ENST00000415891 SPRR2FQ96RM1 72 aa1.57□□□□□ -2.16
CLIP4-205ENST00000415891 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
CLIP4-205ENST00000415891 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
CLIP4-205ENST00000415891 MT1MQ8N339 61 aa1.47□□□□□ -2.17
CLIP4-205ENST00000415891 DSTQ03001 7570 aaKnown RBP1.47□□□□□ -2.17
CLIP4-205ENST00000415891 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
CLIP4-205ENST00000415891 KRTAP6-1Q3LI64 71 aa1.44□□□□□ -2.18
CLIP4-205ENST00000415891 MT4P47944 62 aa1.38□□□□□ -2.19
CLIP4-205ENST00000415891 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
CLIP4-205ENST00000415891 KRTAP20-2Q3LI61 65 aa1.26□□□□□ -2.21
CLIP4-205ENST00000415891 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
CLIP4-205ENST00000415891 PHGR1C9JFL3 82 aa0.89□□□□□ -2.27
CLIP4-205ENST00000415891 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms