RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CDC42SE1Q9NRR8 79 aa2.15□□□□□ -2.07
VPS41-205ENST00000414632 R4GN34 69 aa2.15□□□□□ -2.07
VPS41-205ENST00000414632 KRTAP25-1Q3LHN0 102 aa2.14□□□□□ -2.07
VPS41-205ENST00000414632 LINC01554Q52M75 96 aa2.14□□□□□ -2.07
VPS41-205ENST00000414632 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
VPS41-205ENST00000414632 KRTAP19-8Q3LI54 63 aa2.13□□□□□ -2.07
VPS41-205ENST00000414632 H0YAA0 97 aa2.12□□□□□ -2.07
VPS41-205ENST00000414632 P0C880 135 aa2.12□□□□□ -2.07
VPS41-205ENST00000414632 CRIPTQ9P021 101 aa2.12□□□□□ -2.07
VPS41-205ENST00000414632 A0A1B0GU33 70 aa2.11□□□□□ -2.07
VPS41-205ENST00000414632 ACYP2P14621 99 aa2.11□□□□□ -2.07
VPS41-205ENST00000414632 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
VPS41-205ENST00000414632 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
VPS41-205ENST00000414632 KMT2DO14686 5537 aa2.09□□□□□ -2.07
VPS41-205ENST00000414632 M0QZ58 72 aa2.09□□□□□ -2.07
VPS41-205ENST00000414632 COA5Q86WW8 74 aa2.09□□□□□ -2.07
VPS41-205ENST00000414632 LINC01558Q9Y6Z2 57 aa2.09□□□□□ -2.07
VPS41-205ENST00000414632 KRTAP6-3Q3LI67 103 aa2.05□□□□□ -2.08
VPS41-205ENST00000414632 PLAC4Q8WY50 150 aa2.05□□□□□ -2.08
VPS41-205ENST00000414632 MT1XP80297 61 aa2.03□□□□□ -2.08
VPS41-205ENST00000414632 KRTAP13-4Q3LI77 160 aa2.01□□□□□ -2.09
VPS41-205ENST00000414632 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
VPS41-205ENST00000414632 PRO2289Q9P1D8 64 aa2□□□□□ -2.09
VPS41-205ENST00000414632 ROMO1P60602 79 aa1.99□□□□□ -2.09
VPS41-205ENST00000414632 SPATA8Q6RVD6 105 aa1.99□□□□□ -2.09
VPS41-205ENST00000414632 A0A0D9SG42 100 aa1.97□□□□□ -2.09
VPS41-205ENST00000414632 SPRR2FQ96RM1 72 aa1.95□□□□□ -2.1
VPS41-205ENST00000414632 MIR22HGQ0VDD5 57 aa1.94□□□□□ -2.1
VPS41-205ENST00000414632 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
VPS41-205ENST00000414632 MDN1Q9NU22 5596 aa1.93□□□□□ -2.1
VPS41-205ENST00000414632 A0A1B0GU69 56 aa1.93□□□□□ -2.1
VPS41-205ENST00000414632 KRTAP2-3P0C7H8 128 aa1.92□□□□□ -2.1
VPS41-205ENST00000414632 KRTAP2-4Q9BYR9 128 aa1.92□□□□□ -2.1
VPS41-205ENST00000414632 SPRR2EP22531 72 aa1.9□□□□□ -2.11
VPS41-205ENST00000414632 SPRR2BP35325 72 aa1.9□□□□□ -2.11
VPS41-205ENST00000414632 SPRR2AP35326 72 aa1.9□□□□□ -2.11
VPS41-205ENST00000414632 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
VPS41-205ENST00000414632 LCE3AQ5TA76 89 aa1.89□□□□□ -2.11
VPS41-205ENST00000414632 UQCR11O14957 56 aa1.88□□□□□ -2.11
VPS41-205ENST00000414632 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
VPS41-205ENST00000414632 PP632Q6XCG6 107 aa1.86□□□□□ -2.11
VPS41-205ENST00000414632 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
VPS41-205ENST00000414632 SPRR2DP22532 72 aa1.84□□□□□ -2.11
VPS41-205ENST00000414632 KRTAP2-1Q9BYU5 128 aa1.83□□□□□ -2.12
VPS41-205ENST00000414632 C10orf95Q9H7T3 257 aa1.82□□□□□ -2.12
VPS41-205ENST00000414632 KRTAP19-7Q3SYF9 63 aa1.81□□□□□ -2.12
VPS41-205ENST00000414632 MT1EP04732 61 aa1.8□□□□□ -2.12
VPS41-205ENST00000414632 KRTAP19-5Q3LI72 72 aa1.8□□□□□ -2.12
VPS41-205ENST00000414632 DSTQ03001 7570 aaKnown RBP1.8□□□□□ -2.12
VPS41-205ENST00000414632 TNP1P09430 55 aa1.78□□□□□ -2.12
VPS41-205ENST00000414632 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
VPS41-205ENST00000414632 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
VPS41-205ENST00000414632 MT1LQ93083 61 aa1.72□□□□□ -2.13
VPS41-205ENST00000414632 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
VPS41-205ENST00000414632 MT1GP13640 62 aa1.71□□□□□ -2.14
VPS41-205ENST00000414632 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
VPS41-205ENST00000414632 MT1MQ8N339 61 aa1.71□□□□□ -2.14
VPS41-205ENST00000414632 KRTAP12-3P60328 96 aa1.7□□□□□ -2.14
VPS41-205ENST00000414632 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
VPS41-205ENST00000414632 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
VPS41-205ENST00000414632 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
VPS41-205ENST00000414632 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
VPS41-205ENST00000414632 MT4P47944 62 aa1.62□□□□□ -2.15
VPS41-205ENST00000414632 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
VPS41-205ENST00000414632 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
VPS41-205ENST00000414632 KRTAP12-4P60329 112 aa1.52□□□□□ -2.17
VPS41-205ENST00000414632 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
VPS41-205ENST00000414632 KRTAP20-2Q3LI61 65 aa1.5□□□□□ -2.17
VPS41-205ENST00000414632 KRTAP6-1Q3LI64 71 aa1.47□□□□□ -2.17
VPS41-205ENST00000414632 MT1AP04731 61 aa1.46□□□□□ -2.18
VPS41-205ENST00000414632 INE1O15225 51 aa1.45□□□□□ -2.18
VPS41-205ENST00000414632 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
VPS41-205ENST00000414632 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
VPS41-205ENST00000414632 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
VPS41-205ENST00000414632 PRM1P04553 51 aa1.01□□□□□ -2.25
VPS41-205ENST00000414632 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
VPS41-205ENST00000414632 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
VPS41-205ENST00000414632 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 16.8 ms