RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
LINC00398-201ENST00000414407 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
LINC00398-201ENST00000414407 CDC42SE1Q9NRR8 79 aa6.12□□□□□ -1.43
LINC00398-201ENST00000414407 MT1EP04732 61 aa6.1□□□□□ -1.43
LINC00398-201ENST00000414407 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
LINC00398-201ENST00000414407 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
LINC00398-201ENST00000414407 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
LINC00398-201ENST00000414407 KRTAP19-5Q3LI72 72 aa6.08□□□□□ -1.44
LINC00398-201ENST00000414407 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
LINC00398-201ENST00000414407 SPRR2DP22532 72 aa6.04□□□□□ -1.44
LINC00398-201ENST00000414407 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
LINC00398-201ENST00000414407 KRTAP4-9Q9BYQ8 210 aa6.02□□□□□ -1.45
LINC00398-201ENST00000414407 KRTAP19-3Q7Z4W3 81 aa6□□□□□ -1.45
LINC00398-201ENST00000414407 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
LINC00398-201ENST00000414407 ROMO1P60602 79 aa5.92□□□□□ -1.46
LINC00398-201ENST00000414407 KRTAP4-2Q9BYR5 136 aa5.92□□□□□ -1.46
LINC00398-201ENST00000414407 MT1GP13640 62 aa5.91□□□□□ -1.46
LINC00398-201ENST00000414407 KRTAP2-2Q9BYT5 123 aa5.9□□□□□ -1.46
LINC00398-201ENST00000414407 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.46
LINC00398-201ENST00000414407 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
LINC00398-201ENST00000414407 MT1LQ93083 61 aa5.89□□□□□ -1.47
LINC00398-201ENST00000414407 PP632Q6XCG6 107 aa5.87□□□□□ -1.47
LINC00398-201ENST00000414407 A0A0A0MQY5 61 aa5.84□□□□□ -1.47
LINC00398-201ENST00000414407 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
LINC00398-201ENST00000414407 MT1MQ8N339 61 aa5.78□□□□□ -1.48
LINC00398-201ENST00000414407 BRK1Q8WUW1 75 aa5.75□□□□□ -1.49
LINC00398-201ENST00000414407 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
LINC00398-201ENST00000414407 DSTQ03001 7570 aaKnown RBP5.72□□□□□ -1.49
LINC00398-201ENST00000414407 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
LINC00398-201ENST00000414407 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
LINC00398-201ENST00000414407 PMAIP1Q13794 54 aa5.44□□□□□ -1.54
LINC00398-201ENST00000414407 KRTAP5-4Q6L8H1 288 aa5.36□□□□□ -1.55
LINC00398-201ENST00000414407 KRTAP5-3Q6L8H2 238 aa5.32□□□□□ -1.56
LINC00398-201ENST00000414407 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
LINC00398-201ENST00000414407 KRTAP5-5Q701N2 237 aaPredicted RBP5.29□□□□□ -1.56
LINC00398-201ENST00000414407 MT4P47944 62 aa5.23□□□□□ -1.57
LINC00398-201ENST00000414407 HMCN1Q96RW7 5635 aa5.2□□□□□ -1.58
LINC00398-201ENST00000414407 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
LINC00398-201ENST00000414407 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
LINC00398-201ENST00000414407 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
LINC00398-201ENST00000414407 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
LINC00398-201ENST00000414407 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
LINC00398-201ENST00000414407 MT1AP04731 61 aa5.03□□□□□ -1.6
LINC00398-201ENST00000414407 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
LINC00398-201ENST00000414407 KRTAP20-2Q3LI61 65 aa5.01□□□□□ -1.61
LINC00398-201ENST00000414407 KTN1-AS1Q86SY8 53 aa5.01□□□□□ -1.61
LINC00398-201ENST00000414407 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
LINC00398-201ENST00000414407 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
LINC00398-201ENST00000414407 KRTAP5-10Q6L8G5 202 aa4.8□□□□□ -1.64
LINC00398-201ENST00000414407 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
LINC00398-201ENST00000414407 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
LINC00398-201ENST00000414407 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
LINC00398-201ENST00000414407 MT3P25713 68 aa4.6□□□□□ -1.67
LINC00398-201ENST00000414407 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
LINC00398-201ENST00000414407 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
LINC00398-201ENST00000414407 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
LINC00398-201ENST00000414407 LUZP6Q538Z0 58 aa4.34□□□□□ -1.71
LINC00398-201ENST00000414407 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
LINC00398-201ENST00000414407 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
LINC00398-201ENST00000414407 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
LINC00398-201ENST00000414407 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
LINC00398-201ENST00000414407 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
LINC00398-201ENST00000414407 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
LINC00398-201ENST00000414407 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
LINC00398-201ENST00000414407 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
LINC00398-201ENST00000414407 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
LINC00398-201ENST00000414407 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
LINC00398-201ENST00000414407 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
LINC00398-201ENST00000414407 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
LINC00398-201ENST00000414407 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
LINC00398-201ENST00000414407 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
LINC00398-201ENST00000414407 INE1O15225 51 aa3.11□□□□□ -1.91
LINC00398-201ENST00000414407 PRM1P04553 51 aa3.02□□□□□ -1.93
LINC00398-201ENST00000414407 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
LINC00398-201ENST00000414407 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
LINC00398-201ENST00000414407 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
LINC00398-201ENST00000414407 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 99.4 ms