RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 SPRR2EP22531 72 aa6.67□□□□□ -1.34
SBDS-202ENST00000414306 SPRR2BP35325 72 aa6.67□□□□□ -1.34
SBDS-202ENST00000414306 SPRR2AP35326 72 aa6.67□□□□□ -1.34
SBDS-202ENST00000414306 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
SBDS-202ENST00000414306 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
SBDS-202ENST00000414306 KRTAP19-7Q3SYF9 63 aa6.63□□□□□ -1.35
SBDS-202ENST00000414306 KRTAP19-5Q3LI72 72 aa6.6□□□□□ -1.35
SBDS-202ENST00000414306 LCE1AQ5T7P2 110 aa6.6□□□□□ -1.35
SBDS-202ENST00000414306 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
SBDS-202ENST00000414306 BRK1Q8WUW1 75 aa6.55□□□□□ -1.36
SBDS-202ENST00000414306 MT1EP04732 61 aa6.55□□□□□ -1.36
SBDS-202ENST00000414306 ROMO1P60602 79 aa6.53□□□□□ -1.36
SBDS-202ENST00000414306 SPRR2DP22532 72 aa6.43□□□□□ -1.38
SBDS-202ENST00000414306 KRTAP19-3Q7Z4W3 81 aa6.4□□□□□ -1.39
SBDS-202ENST00000414306 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
SBDS-202ENST00000414306 KRTAP20-1Q3LI63 56 aa6.37□□□□□ -1.39
SBDS-202ENST00000414306 MT1LQ93083 61 aa6.33□□□□□ -1.4
SBDS-202ENST00000414306 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
SBDS-202ENST00000414306 KRTAP2-3P0C7H8 128 aa6.28□□□□□ -1.4
SBDS-202ENST00000414306 KRTAP2-4Q9BYR9 128 aa6.28□□□□□ -1.4
SBDS-202ENST00000414306 MT1GP13640 62 aa6.26□□□□□ -1.41
SBDS-202ENST00000414306 PP632Q6XCG6 107 aa6.21□□□□□ -1.42
SBDS-202ENST00000414306 MT1MQ8N339 61 aa6.2□□□□□ -1.42
SBDS-202ENST00000414306 SVIPQ8NHG7 77 aa6.18□□□□□ -1.42
SBDS-202ENST00000414306 DSTQ03001 7570 aaKnown RBP6.17□□□□□ -1.42
SBDS-202ENST00000414306 PMAIP1Q13794 54 aa6.15□□□□□ -1.43
SBDS-202ENST00000414306 KRTAP4-3Q9BYR4 195 aa6.12□□□□□ -1.43
SBDS-202ENST00000414306 KRTAP2-2Q9BYT5 123 aa6.11□□□□□ -1.43
SBDS-202ENST00000414306 KRTAP2-1Q9BYU5 128 aa6.11□□□□□ -1.43
SBDS-202ENST00000414306 KRTAP19-4Q3LI73 84 aa6.09□□□□□ -1.43
SBDS-202ENST00000414306 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
SBDS-202ENST00000414306 PRO0628Q9UI54 55 aa6.03□□□□□ -1.44
SBDS-202ENST00000414306 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
SBDS-202ENST00000414306 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
SBDS-202ENST00000414306 KTN1-AS1Q86SY8 53 aa5.68□□□□□ -1.5
SBDS-202ENST00000414306 MT4P47944 62 aa5.64□□□□□ -1.51
SBDS-202ENST00000414306 KRTAP5-4Q6L8H1 288 aa5.62□□□□□ -1.51
SBDS-202ENST00000414306 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
SBDS-202ENST00000414306 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
SBDS-202ENST00000414306 HMCN1Q96RW7 5635 aa5.51□□□□□ -1.53
SBDS-202ENST00000414306 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
SBDS-202ENST00000414306 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
SBDS-202ENST00000414306 MT1AP04731 61 aa5.37□□□□□ -1.55
SBDS-202ENST00000414306 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
SBDS-202ENST00000414306 KRTAP20-2Q3LI61 65 aa5.32□□□□□ -1.56
SBDS-202ENST00000414306 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
SBDS-202ENST00000414306 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.19□□□□□ -1.58
SBDS-202ENST00000414306 AHNAK2Q8IVF2 5795 aa5.17□□□□□ -1.58
SBDS-202ENST00000414306 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
SBDS-202ENST00000414306 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
SBDS-202ENST00000414306 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
SBDS-202ENST00000414306 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
SBDS-202ENST00000414306 KRTAP5-10Q6L8G5 202 aa4.94□□□□□ -1.62
SBDS-202ENST00000414306 MT3P25713 68 aa4.88□□□□□ -1.63
SBDS-202ENST00000414306 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
SBDS-202ENST00000414306 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
SBDS-202ENST00000414306 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
SBDS-202ENST00000414306 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
SBDS-202ENST00000414306 KRTAP5-8O75690 187 aa4.57□□□□□ -1.68
SBDS-202ENST00000414306 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
SBDS-202ENST00000414306 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
SBDS-202ENST00000414306 LCE3DQ9BYE3 92 aa4.35□□□□□ -1.71
SBDS-202ENST00000414306 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
SBDS-202ENST00000414306 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
SBDS-202ENST00000414306 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
SBDS-202ENST00000414306 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
SBDS-202ENST00000414306 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
SBDS-202ENST00000414306 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
SBDS-202ENST00000414306 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
SBDS-202ENST00000414306 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
SBDS-202ENST00000414306 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
SBDS-202ENST00000414306 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
SBDS-202ENST00000414306 INE1O15225 51 aa3.47□□□□□ -1.85
SBDS-202ENST00000414306 PRM1P04553 51 aa3.4□□□□□ -1.86
SBDS-202ENST00000414306 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
SBDS-202ENST00000414306 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
SBDS-202ENST00000414306 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
SBDS-202ENST00000414306 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 42.9 ms