RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 SPRR2DP22532 72 aa6.65□□□□□ -1.35
SCAMP4-204ENST00000414057 KRTAP2-2Q9BYT5 123 aa6.64□□□□□ -1.35
SCAMP4-204ENST00000414057 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
SCAMP4-204ENST00000414057 KRTAP23-1A1A580 65 aa6.63□□□□□ -1.35
SCAMP4-204ENST00000414057 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
SCAMP4-204ENST00000414057 SVIPQ8NHG7 77 aa6.57□□□□□ -1.36
SCAMP4-204ENST00000414057 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
SCAMP4-204ENST00000414057 LCE3AQ5TA76 89 aa6.44□□□□□ -1.38
SCAMP4-204ENST00000414057 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
SCAMP4-204ENST00000414057 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
SCAMP4-204ENST00000414057 MT1EP04732 61 aa6.23□□□□□ -1.41
SCAMP4-204ENST00000414057 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
SCAMP4-204ENST00000414057 KRTAP19-3Q7Z4W3 81 aa6.22□□□□□ -1.41
SCAMP4-204ENST00000414057 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
SCAMP4-204ENST00000414057 DSTQ03001 7570 aaKnown RBP6.14□□□□□ -1.43
SCAMP4-204ENST00000414057 MT1GP13640 62 aa6.09□□□□□ -1.43
SCAMP4-204ENST00000414057 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
SCAMP4-204ENST00000414057 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
SCAMP4-204ENST00000414057 KRTAP19-4Q3LI73 84 aa6□□□□□ -1.45
SCAMP4-204ENST00000414057 MT1MQ8N339 61 aa5.94□□□□□ -1.46
SCAMP4-204ENST00000414057 MT1LQ93083 61 aa5.93□□□□□ -1.46
SCAMP4-204ENST00000414057 GPR98Q8WXG9 6306 aa5.91□□□□□ -1.46
SCAMP4-204ENST00000414057 LCE4AQ5TA78 99 aa5.9□□□□□ -1.47
SCAMP4-204ENST00000414057 LCE1DQ5T752 114 aa5.86□□□□□ -1.47
SCAMP4-204ENST00000414057 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
SCAMP4-204ENST00000414057 MT4P47944 62 aa5.79□□□□□ -1.48
SCAMP4-204ENST00000414057 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
SCAMP4-204ENST00000414057 KRTAP4-3Q9BYR4 195 aa5.75□□□□□ -1.49
SCAMP4-204ENST00000414057 HMCN1Q96RW7 5635 aa5.73□□□□□ -1.49
SCAMP4-204ENST00000414057 KRTAP5-4Q6L8H1 288 aa5.71□□□□□ -1.49
SCAMP4-204ENST00000414057 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
SCAMP4-204ENST00000414057 KRTAP4-6Q9BYQ5 205 aa5.6□□□□□ -1.51
SCAMP4-204ENST00000414057 LUZP6Q538Z0 58 aa5.56□□□□□ -1.52
SCAMP4-204ENST00000414057 AHNAK2Q8IVF2 5795 aa5.54□□□□□ -1.52
SCAMP4-204ENST00000414057 KRTAP5-10Q6L8G5 202 aa5.5□□□□□ -1.53
SCAMP4-204ENST00000414057 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
SCAMP4-204ENST00000414057 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
SCAMP4-204ENST00000414057 KRTAP12-4P60329 112 aa5.41□□□□□ -1.54
SCAMP4-204ENST00000414057 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
SCAMP4-204ENST00000414057 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
SCAMP4-204ENST00000414057 LOC100996750A0A140TA64 210 aa5.32□□□□□ -1.56
SCAMP4-204ENST00000414057 KRTAP5-7Q6L8G8 165 aa5.31□□□□□ -1.56
SCAMP4-204ENST00000414057 NDUFAF8A1L188 74 aa5.28□□□□□ -1.56
SCAMP4-204ENST00000414057 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
SCAMP4-204ENST00000414057 MT1AP04731 61 aa5.07□□□□□ -1.6
SCAMP4-204ENST00000414057 KRTAP6-1Q3LI64 71 aa5.01□□□□□ -1.61
SCAMP4-204ENST00000414057 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
SCAMP4-204ENST00000414057 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
SCAMP4-204ENST00000414057 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
SCAMP4-204ENST00000414057 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
SCAMP4-204ENST00000414057 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
SCAMP4-204ENST00000414057 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
SCAMP4-204ENST00000414057 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
SCAMP4-204ENST00000414057 MT3P25713 68 aa4.68□□□□□ -1.66
SCAMP4-204ENST00000414057 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
SCAMP4-204ENST00000414057 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
SCAMP4-204ENST00000414057 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
SCAMP4-204ENST00000414057 AHNAKQ09666 5890 aaKnown RBP4.56□□□□□ -1.68
SCAMP4-204ENST00000414057 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
SCAMP4-204ENST00000414057 INE1O15225 51 aa4.46□□□□□ -1.7
SCAMP4-204ENST00000414057 H3BS24 57 aa4.45□□□□□ -1.7
SCAMP4-204ENST00000414057 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
SCAMP4-204ENST00000414057 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
SCAMP4-204ENST00000414057 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
SCAMP4-204ENST00000414057 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
SCAMP4-204ENST00000414057 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
SCAMP4-204ENST00000414057 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
SCAMP4-204ENST00000414057 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
SCAMP4-204ENST00000414057 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
SCAMP4-204ENST00000414057 PRM1P04553 51 aa3.61□□□□□ -1.83
SCAMP4-204ENST00000414057 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
SCAMP4-204ENST00000414057 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
SCAMP4-204ENST00000414057 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
SCAMP4-204ENST00000414057 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
SCAMP4-204ENST00000414057 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
SCAMP4-204ENST00000414057 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
SCAMP4-204ENST00000414057 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
SCAMP4-204ENST00000414057 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 58 ms