RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 TNP1P09430 55 aa4.04□□□□□ -1.76
HLA-DMB-257ENST00000414017 PRO0628Q9UI54 55 aa4.04□□□□□ -1.76
HLA-DMB-257ENST00000414017 KRTAP5-9P26371 169 aa4.03□□□□□ -1.76
HLA-DMB-257ENST00000414017 CDC42SE1Q9NRR8 79 aa4.01□□□□□ -1.77
HLA-DMB-257ENST00000414017 NEBP20929 6669 aa3.98□□□□□ -1.77
HLA-DMB-257ENST00000414017 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
HLA-DMB-257ENST00000414017 BRK1Q8WUW1 75 aa3.96□□□□□ -1.78
HLA-DMB-257ENST00000414017 SPRR2EP22531 72 aa3.95□□□□□ -1.78
HLA-DMB-257ENST00000414017 SPRR2BP35325 72 aa3.95□□□□□ -1.78
HLA-DMB-257ENST00000414017 SPRR2AP35326 72 aa3.95□□□□□ -1.78
HLA-DMB-257ENST00000414017 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
HLA-DMB-257ENST00000414017 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.79
HLA-DMB-257ENST00000414017 KRTAP19-5Q3LI72 72 aa3.9□□□□□ -1.79
HLA-DMB-257ENST00000414017 ROMO1P60602 79 aa3.88□□□□□ -1.79
HLA-DMB-257ENST00000414017 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
HLA-DMB-257ENST00000414017 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
HLA-DMB-257ENST00000414017 MT1EP04732 61 aa3.85□□□□□ -1.79
HLA-DMB-257ENST00000414017 SPRR2DP22532 72 aa3.82□□□□□ -1.8
HLA-DMB-257ENST00000414017 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
HLA-DMB-257ENST00000414017 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
HLA-DMB-257ENST00000414017 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
HLA-DMB-257ENST00000414017 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
HLA-DMB-257ENST00000414017 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
HLA-DMB-257ENST00000414017 MT1LQ93083 61 aa3.72□□□□□ -1.81
HLA-DMB-257ENST00000414017 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
HLA-DMB-257ENST00000414017 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
HLA-DMB-257ENST00000414017 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
HLA-DMB-257ENST00000414017 MT1GP13640 62 aa3.7□□□□□ -1.82
HLA-DMB-257ENST00000414017 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
HLA-DMB-257ENST00000414017 MT1MQ8N339 61 aa3.65□□□□□ -1.83
HLA-DMB-257ENST00000414017 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
HLA-DMB-257ENST00000414017 KRTAP2-2Q9BYT5 123 aa3.61□□□□□ -1.83
HLA-DMB-257ENST00000414017 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
HLA-DMB-257ENST00000414017 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
HLA-DMB-257ENST00000414017 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
HLA-DMB-257ENST00000414017 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
HLA-DMB-257ENST00000414017 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
HLA-DMB-257ENST00000414017 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
HLA-DMB-257ENST00000414017 MT4P47944 62 aa3.34□□□□□ -1.87
HLA-DMB-257ENST00000414017 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
HLA-DMB-257ENST00000414017 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
HLA-DMB-257ENST00000414017 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
HLA-DMB-257ENST00000414017 MT3P25713 68 aa3.27□□□□□ -1.89
HLA-DMB-257ENST00000414017 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
HLA-DMB-257ENST00000414017 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
HLA-DMB-257ENST00000414017 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
HLA-DMB-257ENST00000414017 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
HLA-DMB-257ENST00000414017 MT1AP04731 61 aa3.17□□□□□ -1.9
HLA-DMB-257ENST00000414017 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.9
HLA-DMB-257ENST00000414017 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
HLA-DMB-257ENST00000414017 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
HLA-DMB-257ENST00000414017 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
HLA-DMB-257ENST00000414017 A0A0A0MQY5 61 aa3.1□□□□□ -1.91
HLA-DMB-257ENST00000414017 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
HLA-DMB-257ENST00000414017 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
HLA-DMB-257ENST00000414017 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
HLA-DMB-257ENST00000414017 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
HLA-DMB-257ENST00000414017 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
HLA-DMB-257ENST00000414017 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
HLA-DMB-257ENST00000414017 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
HLA-DMB-257ENST00000414017 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
HLA-DMB-257ENST00000414017 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
HLA-DMB-257ENST00000414017 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
HLA-DMB-257ENST00000414017 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
HLA-DMB-257ENST00000414017 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
HLA-DMB-257ENST00000414017 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
HLA-DMB-257ENST00000414017 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
HLA-DMB-257ENST00000414017 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
HLA-DMB-257ENST00000414017 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
HLA-DMB-257ENST00000414017 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
HLA-DMB-257ENST00000414017 INE1O15225 51 aa2.43□□□□□ -2.02
HLA-DMB-257ENST00000414017 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
HLA-DMB-257ENST00000414017 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
HLA-DMB-257ENST00000414017 PRM1P04553 51 aa2.02□□□□□ -2.09
HLA-DMB-257ENST00000414017 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
HLA-DMB-257ENST00000414017 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
HLA-DMB-257ENST00000414017 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
HLA-DMB-257ENST00000414017 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 48.9 ms