RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 TNP1P09430 55 aa4.55□□□□□ -1.68
HDAC9-206ENST00000413380 MT3P25713 68 aa4.55□□□□□ -1.68
HDAC9-206ENST00000413380 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
HDAC9-206ENST00000413380 ROMO1P60602 79 aa4.51□□□□□ -1.69
HDAC9-206ENST00000413380 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
HDAC9-206ENST00000413380 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.7
HDAC9-206ENST00000413380 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
HDAC9-206ENST00000413380 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
HDAC9-206ENST00000413380 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
HDAC9-206ENST00000413380 LCE3AQ5TA76 89 aa4.4□□□□□ -1.71
HDAC9-206ENST00000413380 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
HDAC9-206ENST00000413380 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
HDAC9-206ENST00000413380 MUC12Q9UKN1 5478 aa4.34□□□□□ -1.71
HDAC9-206ENST00000413380 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
HDAC9-206ENST00000413380 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
HDAC9-206ENST00000413380 KRTAP19-5Q3LI72 72 aa4.3□□□□□ -1.72
HDAC9-206ENST00000413380 MT1EP04732 61 aa4.29□□□□□ -1.72
HDAC9-206ENST00000413380 MDN1Q9NU22 5596 aa4.29□□□□□ -1.72
HDAC9-206ENST00000413380 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
HDAC9-206ENST00000413380 NEBP20929 6669 aa4.2□□□□□ -1.74
HDAC9-206ENST00000413380 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
HDAC9-206ENST00000413380 SPRR2EP22531 72 aa4.16□□□□□ -1.74
HDAC9-206ENST00000413380 SPRR2BP35325 72 aa4.16□□□□□ -1.74
HDAC9-206ENST00000413380 SPRR2AP35326 72 aa4.16□□□□□ -1.74
HDAC9-206ENST00000413380 KRTAP19-3Q7Z4W3 81 aa4.16□□□□□ -1.74
HDAC9-206ENST00000413380 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
HDAC9-206ENST00000413380 MT1LQ93083 61 aa4.16□□□□□ -1.74
HDAC9-206ENST00000413380 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
HDAC9-206ENST00000413380 MT1GP13640 62 aa4.11□□□□□ -1.75
HDAC9-206ENST00000413380 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
HDAC9-206ENST00000413380 MT1MQ8N339 61 aa4.04□□□□□ -1.76
HDAC9-206ENST00000413380 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
HDAC9-206ENST00000413380 SPRR2DP22532 72 aa4.02□□□□□ -1.77
HDAC9-206ENST00000413380 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
HDAC9-206ENST00000413380 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
HDAC9-206ENST00000413380 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
HDAC9-206ENST00000413380 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
HDAC9-206ENST00000413380 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
HDAC9-206ENST00000413380 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
HDAC9-206ENST00000413380 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.78
HDAC9-206ENST00000413380 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
HDAC9-206ENST00000413380 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
HDAC9-206ENST00000413380 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
HDAC9-206ENST00000413380 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
HDAC9-206ENST00000413380 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
HDAC9-206ENST00000413380 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
HDAC9-206ENST00000413380 MT1AP04731 61 aa3.55□□□□□ -1.84
HDAC9-206ENST00000413380 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
HDAC9-206ENST00000413380 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
HDAC9-206ENST00000413380 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
HDAC9-206ENST00000413380 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
HDAC9-206ENST00000413380 MT4P47944 62 aa3.46□□□□□ -1.86
HDAC9-206ENST00000413380 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
HDAC9-206ENST00000413380 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
HDAC9-206ENST00000413380 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
HDAC9-206ENST00000413380 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
HDAC9-206ENST00000413380 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
HDAC9-206ENST00000413380 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
HDAC9-206ENST00000413380 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
HDAC9-206ENST00000413380 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
HDAC9-206ENST00000413380 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
HDAC9-206ENST00000413380 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
HDAC9-206ENST00000413380 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
HDAC9-206ENST00000413380 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
HDAC9-206ENST00000413380 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
HDAC9-206ENST00000413380 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
HDAC9-206ENST00000413380 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
HDAC9-206ENST00000413380 INE1O15225 51 aa2.82□□□□□ -1.96
HDAC9-206ENST00000413380 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
HDAC9-206ENST00000413380 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
HDAC9-206ENST00000413380 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
HDAC9-206ENST00000413380 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
HDAC9-206ENST00000413380 PRM1P04553 51 aa2.32□□□□□ -2.04
HDAC9-206ENST00000413380 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
HDAC9-206ENST00000413380 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
HDAC9-206ENST00000413380 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
HDAC9-206ENST00000413380 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
HDAC9-206ENST00000413380 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 45.2 ms