RNA–Protein interactions for RNA: ENST00000412947.5

ZNF3-204, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-204ENST00000412947 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
ZNF3-204ENST00000412947 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
ZNF3-204ENST00000412947 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
ZNF3-204ENST00000412947 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
ZNF3-204ENST00000412947 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
ZNF3-204ENST00000412947 MT1LQ93083 61 aa4.53□□□□□ -1.68
ZNF3-204ENST00000412947 MT1GP13640 62 aa4.52□□□□□ -1.69
ZNF3-204ENST00000412947 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
ZNF3-204ENST00000412947 LCE3BQ5TA77 95 aa4.46□□□□□ -1.7
ZNF3-204ENST00000412947 MT1MQ8N339 61 aa4.44□□□□□ -1.7
ZNF3-204ENST00000412947 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
ZNF3-204ENST00000412947 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
ZNF3-204ENST00000412947 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
ZNF3-204ENST00000412947 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
ZNF3-204ENST00000412947 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
ZNF3-204ENST00000412947 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
ZNF3-204ENST00000412947 KRTAP4-7Q9BYR0 210 aa4.3□□□□□ -1.72
ZNF3-204ENST00000412947 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
ZNF3-204ENST00000412947 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
ZNF3-204ENST00000412947 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
ZNF3-204ENST00000412947 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
ZNF3-204ENST00000412947 LCE4AQ5TA78 99 aa4.1□□□□□ -1.75
ZNF3-204ENST00000412947 SVIPQ8NHG7 77 aa4.1□□□□□ -1.75
ZNF3-204ENST00000412947 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
ZNF3-204ENST00000412947 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
ZNF3-204ENST00000412947 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
ZNF3-204ENST00000412947 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
ZNF3-204ENST00000412947 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
ZNF3-204ENST00000412947 MT4P47944 62 aa4.01□□□□□ -1.77
ZNF3-204ENST00000412947 LCE1DQ5T752 114 aa4□□□□□ -1.77
ZNF3-204ENST00000412947 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
ZNF3-204ENST00000412947 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
ZNF3-204ENST00000412947 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
ZNF3-204ENST00000412947 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
ZNF3-204ENST00000412947 MT1AP04731 61 aa3.86□□□□□ -1.79
ZNF3-204ENST00000412947 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
ZNF3-204ENST00000412947 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
ZNF3-204ENST00000412947 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
ZNF3-204ENST00000412947 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
ZNF3-204ENST00000412947 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
ZNF3-204ENST00000412947 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
ZNF3-204ENST00000412947 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
ZNF3-204ENST00000412947 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
ZNF3-204ENST00000412947 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
ZNF3-204ENST00000412947 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
ZNF3-204ENST00000412947 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
ZNF3-204ENST00000412947 MT3P25713 68 aa3.53□□□□□ -1.84
ZNF3-204ENST00000412947 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
ZNF3-204ENST00000412947 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
ZNF3-204ENST00000412947 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
ZNF3-204ENST00000412947 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
ZNF3-204ENST00000412947 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
ZNF3-204ENST00000412947 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
ZNF3-204ENST00000412947 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
ZNF3-204ENST00000412947 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
ZNF3-204ENST00000412947 H3BS24 57 aa3.11□□□□□ -1.91
ZNF3-204ENST00000412947 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
ZNF3-204ENST00000412947 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.91
ZNF3-204ENST00000412947 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
ZNF3-204ENST00000412947 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
ZNF3-204ENST00000412947 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
ZNF3-204ENST00000412947 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
ZNF3-204ENST00000412947 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
ZNF3-204ENST00000412947 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
ZNF3-204ENST00000412947 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
ZNF3-204ENST00000412947 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
ZNF3-204ENST00000412947 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
ZNF3-204ENST00000412947 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
ZNF3-204ENST00000412947 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
ZNF3-204ENST00000412947 INE1O15225 51 aa2.52□□□□□ -2.01
ZNF3-204ENST00000412947 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
ZNF3-204ENST00000412947 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
ZNF3-204ENST00000412947 PRM1P04553 51 aa2.41□□□□□ -2.02
ZNF3-204ENST00000412947 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
ZNF3-204ENST00000412947 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
ZNF3-204ENST00000412947 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
ZNF3-204ENST00000412947 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
ZNF3-204ENST00000412947 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 46.9 ms