RNA–Protein interactions for RNA: ENST00000412413.1

AC004009.1-201, humanhuman

TSL 5 BASIC

Gene AC004009.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.1-201ENST00000412413 P0C880 135 aa3.39□□□□□ -1.87
AC004009.1-201ENST00000412413 Q1T7F1 81 aa3.39□□□□□ -1.87
AC004009.1-201ENST00000412413 R4GN34 69 aa3.38□□□□□ -1.87
AC004009.1-201ENST00000412413 LINC01554Q52M75 96 aa3.37□□□□□ -1.87
AC004009.1-201ENST00000412413 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
AC004009.1-201ENST00000412413 M0QZ58 72 aa3.36□□□□□ -1.87
AC004009.1-201ENST00000412413 PSPHP1O15172 72 aa3.36□□□□□ -1.87
AC004009.1-201ENST00000412413 A0A1B0GU33 70 aa3.35□□□□□ -1.87
AC004009.1-201ENST00000412413 KRTAP12-2P59991 146 aa3.35□□□□□ -1.87
AC004009.1-201ENST00000412413 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
AC004009.1-201ENST00000412413 UQCR11O14957 56 aa3.31□□□□□ -1.88
AC004009.1-201ENST00000412413 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
AC004009.1-201ENST00000412413 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
AC004009.1-201ENST00000412413 A6NED7 52 aa3.29□□□□□ -1.88
AC004009.1-201ENST00000412413 SPATA8Q6RVD6 105 aa3.29□□□□□ -1.88
AC004009.1-201ENST00000412413 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
AC004009.1-201ENST00000412413 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
AC004009.1-201ENST00000412413 A0A0D9SG42 100 aa3.26□□□□□ -1.89
AC004009.1-201ENST00000412413 MIR22HGQ0VDD5 57 aa3.26□□□□□ -1.89
AC004009.1-201ENST00000412413 A8MU10 97 aa3.22□□□□□ -1.89
AC004009.1-201ENST00000412413 SPINT4Q6UDR6 99 aa3.21□□□□□ -1.9
AC004009.1-201ENST00000412413 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
AC004009.1-201ENST00000412413 K7ERS5 55 aa3.19□□□□□ -1.9
AC004009.1-201ENST00000412413 CDC42SE1Q9NRR8 79 aa3.19□□□□□ -1.9
AC004009.1-201ENST00000412413 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
AC004009.1-201ENST00000412413 CAMK2N1Q7Z7J9 78 aa3.17□□□□□ -1.9
AC004009.1-201ENST00000412413 BRK1Q8WUW1 75 aa3.17□□□□□ -1.9
AC004009.1-201ENST00000412413 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
AC004009.1-201ENST00000412413 MT1EP04732 61 aa3.06□□□□□ -1.92
AC004009.1-201ENST00000412413 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
AC004009.1-201ENST00000412413 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
AC004009.1-201ENST00000412413 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
AC004009.1-201ENST00000412413 MT4P47944 62 aa3.02□□□□□ -1.93
AC004009.1-201ENST00000412413 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
AC004009.1-201ENST00000412413 PRO0628Q9UI54 55 aa3.01□□□□□ -1.93
AC004009.1-201ENST00000412413 ROMO1P60602 79 aa2.99□□□□□ -1.93
AC004009.1-201ENST00000412413 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
AC004009.1-201ENST00000412413 PMAIP1Q13794 54 aa2.98□□□□□ -1.93
AC004009.1-201ENST00000412413 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
AC004009.1-201ENST00000412413 TNP1P09430 55 aa2.97□□□□□ -1.93
AC004009.1-201ENST00000412413 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
AC004009.1-201ENST00000412413 MT1GP13640 62 aa2.96□□□□□ -1.94
AC004009.1-201ENST00000412413 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
AC004009.1-201ENST00000412413 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
AC004009.1-201ENST00000412413 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
AC004009.1-201ENST00000412413 MT1MQ8N339 61 aa2.93□□□□□ -1.94
AC004009.1-201ENST00000412413 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
AC004009.1-201ENST00000412413 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
AC004009.1-201ENST00000412413 MT1LQ93083 61 aa2.89□□□□□ -1.95
AC004009.1-201ENST00000412413 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
AC004009.1-201ENST00000412413 LCE3AQ5TA76 89 aa2.84□□□□□ -1.95
AC004009.1-201ENST00000412413 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
AC004009.1-201ENST00000412413 KTN1-AS1Q86SY8 53 aa2.82□□□□□ -1.96
AC004009.1-201ENST00000412413 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
AC004009.1-201ENST00000412413 KRTAP12-3P60328 96 aa2.73□□□□□ -1.97
AC004009.1-201ENST00000412413 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
AC004009.1-201ENST00000412413 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
AC004009.1-201ENST00000412413 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
AC004009.1-201ENST00000412413 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
AC004009.1-201ENST00000412413 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
AC004009.1-201ENST00000412413 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
AC004009.1-201ENST00000412413 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
AC004009.1-201ENST00000412413 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
AC004009.1-201ENST00000412413 KRTAP6-1Q3LI64 71 aa2.47□□□□□ -2.01
AC004009.1-201ENST00000412413 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
AC004009.1-201ENST00000412413 MT1AP04731 61 aa2.45□□□□□ -2.02
AC004009.1-201ENST00000412413 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
AC004009.1-201ENST00000412413 LUZP6Q538Z0 58 aa2.35□□□□□ -2.03
AC004009.1-201ENST00000412413 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
AC004009.1-201ENST00000412413 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
AC004009.1-201ENST00000412413 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
AC004009.1-201ENST00000412413 INE1O15225 51 aa1.8□□□□□ -2.12
AC004009.1-201ENST00000412413 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
AC004009.1-201ENST00000412413 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
AC004009.1-201ENST00000412413 PRM1P04553 51 aa1.55□□□□□ -2.16
AC004009.1-201ENST00000412413 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
AC004009.1-201ENST00000412413 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 20.5 ms