RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
BRCC3-207ENST00000411985 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
BRCC3-207ENST00000411985 A8MU10 97 aa3.42□□□□□ -1.86
BRCC3-207ENST00000411985 MT1EP04732 61 aa3.42□□□□□ -1.86
BRCC3-207ENST00000411985 PRR15LQ9BU68 103 aa3.41□□□□□ -1.86
BRCC3-207ENST00000411985 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
BRCC3-207ENST00000411985 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
BRCC3-207ENST00000411985 LINC01558Q9Y6Z2 57 aa3.37□□□□□ -1.87
BRCC3-207ENST00000411985 TMEM258P61165 79 aa3.36□□□□□ -1.87
BRCC3-207ENST00000411985 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
BRCC3-207ENST00000411985 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
BRCC3-207ENST00000411985 MT3P25713 68 aa3.34□□□□□ -1.87
BRCC3-207ENST00000411985 TNP1P09430 55 aa3.33□□□□□ -1.88
BRCC3-207ENST00000411985 C10orf95Q9H7T3 257 aa3.33□□□□□ -1.88
BRCC3-207ENST00000411985 MT1GP13640 62 aa3.31□□□□□ -1.88
BRCC3-207ENST00000411985 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
BRCC3-207ENST00000411985 UQCR11O14957 56 aa3.3□□□□□ -1.88
BRCC3-207ENST00000411985 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
BRCC3-207ENST00000411985 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
BRCC3-207ENST00000411985 MT1LQ93083 61 aa3.27□□□□□ -1.89
BRCC3-207ENST00000411985 MT1MQ8N339 61 aa3.26□□□□□ -1.89
BRCC3-207ENST00000411985 PCP4P48539 62 aa3.23□□□□□ -1.89
BRCC3-207ENST00000411985 MIR22HGQ0VDD5 57 aa3.21□□□□□ -1.9
BRCC3-207ENST00000411985 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
BRCC3-207ENST00000411985 V9GYY9 64 aa3.18□□□□□ -1.9
BRCC3-207ENST00000411985 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
BRCC3-207ENST00000411985 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
BRCC3-207ENST00000411985 K7ERS5 55 aa3.16□□□□□ -1.9
BRCC3-207ENST00000411985 PSPHP1O15172 72 aa3.15□□□□□ -1.91
BRCC3-207ENST00000411985 Q1T7F1 81 aa3.15□□□□□ -1.91
BRCC3-207ENST00000411985 KRTAP25-1Q3LHN0 102 aa3.15□□□□□ -1.91
BRCC3-207ENST00000411985 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
BRCC3-207ENST00000411985 MT4P47944 62 aa3.11□□□□□ -1.91
BRCC3-207ENST00000411985 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
BRCC3-207ENST00000411985 A6NED7 52 aa3.05□□□□□ -1.92
BRCC3-207ENST00000411985 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
BRCC3-207ENST00000411985 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
BRCC3-207ENST00000411985 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
BRCC3-207ENST00000411985 CDC42SE1Q9NRR8 79 aa2.99□□□□□ -1.93
BRCC3-207ENST00000411985 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
BRCC3-207ENST00000411985 RPS28P62857 69 aaKnown RBP2.97□□□□□ -1.93
BRCC3-207ENST00000411985 ROMO1P60602 79 aa2.94□□□□□ -1.94
BRCC3-207ENST00000411985 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
BRCC3-207ENST00000411985 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
BRCC3-207ENST00000411985 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
BRCC3-207ENST00000411985 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
BRCC3-207ENST00000411985 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
BRCC3-207ENST00000411985 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
BRCC3-207ENST00000411985 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
BRCC3-207ENST00000411985 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
BRCC3-207ENST00000411985 MT1AP04731 61 aa2.78□□□□□ -1.96
BRCC3-207ENST00000411985 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
BRCC3-207ENST00000411985 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
BRCC3-207ENST00000411985 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
BRCC3-207ENST00000411985 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
BRCC3-207ENST00000411985 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
BRCC3-207ENST00000411985 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
BRCC3-207ENST00000411985 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
BRCC3-207ENST00000411985 BRK1Q8WUW1 75 aa2.63□□□□□ -1.99
BRCC3-207ENST00000411985 PRAC1Q96KF2 57 aa2.63□□□□□ -1.99
BRCC3-207ENST00000411985 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
BRCC3-207ENST00000411985 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
BRCC3-207ENST00000411985 KRTAP5-8O75690 187 aa2.57□□□□□ -2
BRCC3-207ENST00000411985 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
BRCC3-207ENST00000411985 PRO0628Q9UI54 55 aa2.48□□□□□ -2.01
BRCC3-207ENST00000411985 PMAIP1Q13794 54 aa2.46□□□□□ -2.02
BRCC3-207ENST00000411985 KTN1-AS1Q86SY8 53 aa2.31□□□□□ -2.04
BRCC3-207ENST00000411985 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
BRCC3-207ENST00000411985 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
BRCC3-207ENST00000411985 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
BRCC3-207ENST00000411985 LUZP6Q538Z0 58 aa2.01□□□□□ -2.09
BRCC3-207ENST00000411985 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
BRCC3-207ENST00000411985 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
BRCC3-207ENST00000411985 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
BRCC3-207ENST00000411985 PRM1P04553 51 aa1.5□□□□□ -2.17
BRCC3-207ENST00000411985 INE1O15225 51 aa1.46□□□□□ -2.18
BRCC3-207ENST00000411985 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
BRCC3-207ENST00000411985 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 113 ms