RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
CDC42-204ENST00000411827 KRTAP23-1A1A580 65 aa7.19□□□□□ -1.26
CDC42-204ENST00000411827 PMAIP1Q13794 54 aa7.19□□□□□ -1.26
CDC42-204ENST00000411827 KRTAP5-9P26371 169 aa7.16□□□□□ -1.26
CDC42-204ENST00000411827 LCE5AQ5TCM9 118 aa7.16□□□□□ -1.26
CDC42-204ENST00000411827 KRTAP20-1Q3LI63 56 aa7.08□□□□□ -1.28
CDC42-204ENST00000411827 PP632Q6XCG6 107 aa7.08□□□□□ -1.28
CDC42-204ENST00000411827 LCE3AQ5TA76 89 aa7.07□□□□□ -1.28
CDC42-204ENST00000411827 KRTAP4-11Q9BYQ6 195 aa7.02□□□□□ -1.29
CDC42-204ENST00000411827 SPRR2FQ96RM1 72 aa7.01□□□□□ -1.29
CDC42-204ENST00000411827 KRTAP4-2Q9BYR5 136 aa6.97□□□□□ -1.29
CDC42-204ENST00000411827 KRTAP19-7Q3SYF9 63 aa6.93□□□□□ -1.3
CDC42-204ENST00000411827 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
CDC42-204ENST00000411827 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
CDC42-204ENST00000411827 MT1EP04732 61 aa6.86□□□□□ -1.31
CDC42-204ENST00000411827 KRTAP2-3P0C7H8 128 aa6.84□□□□□ -1.31
CDC42-204ENST00000411827 KRTAP2-4Q9BYR9 128 aa6.84□□□□□ -1.31
CDC42-204ENST00000411827 SPRR2EP22531 72 aa6.81□□□□□ -1.32
CDC42-204ENST00000411827 SPRR2BP35325 72 aa6.81□□□□□ -1.32
CDC42-204ENST00000411827 SPRR2AP35326 72 aa6.81□□□□□ -1.32
CDC42-204ENST00000411827 LCE1AQ5T7P2 110 aa6.76□□□□□ -1.33
CDC42-204ENST00000411827 KTN1-AS1Q86SY8 53 aa6.76□□□□□ -1.33
CDC42-204ENST00000411827 KRTAP19-3Q7Z4W3 81 aa6.7□□□□□ -1.34
CDC42-204ENST00000411827 MT1GP13640 62 aa6.67□□□□□ -1.34
CDC42-204ENST00000411827 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
CDC42-204ENST00000411827 MT1LQ93083 61 aa6.66□□□□□ -1.34
CDC42-204ENST00000411827 PRAC1Q96KF2 57 aa6.62□□□□□ -1.35
CDC42-204ENST00000411827 KRTAP2-2Q9BYT5 123 aa6.62□□□□□ -1.35
CDC42-204ENST00000411827 KRTAP2-1Q9BYU5 128 aa6.62□□□□□ -1.35
CDC42-204ENST00000411827 SPRR2DP22532 72 aa6.58□□□□□ -1.36
CDC42-204ENST00000411827 MT1MQ8N339 61 aa6.48□□□□□ -1.37
CDC42-204ENST00000411827 LCE3CQ5T5A8 94 aa6.39□□□□□ -1.39
CDC42-204ENST00000411827 KRTAP4-3Q9BYR4 195 aa6.2□□□□□ -1.42
CDC42-204ENST00000411827 DSTQ03001 7570 aaKnown RBP6.18□□□□□ -1.42
CDC42-204ENST00000411827 GPR98Q8WXG9 6306 aa6.11□□□□□ -1.43
CDC42-204ENST00000411827 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
CDC42-204ENST00000411827 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
CDC42-204ENST00000411827 HMCN1Q96RW7 5635 aa5.94□□□□□ -1.46
CDC42-204ENST00000411827 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
CDC42-204ENST00000411827 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
CDC42-204ENST00000411827 KRTAP5-4Q6L8H1 288 aa5.85□□□□□ -1.47
CDC42-204ENST00000411827 MT4P47944 62 aa5.8□□□□□ -1.48
CDC42-204ENST00000411827 AHNAK2Q8IVF2 5795 aa5.79□□□□□ -1.48
CDC42-204ENST00000411827 MT1AP04731 61 aa5.71□□□□□ -1.5
CDC42-204ENST00000411827 LUZP6Q538Z0 58 aa5.7□□□□□ -1.5
CDC42-204ENST00000411827 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
CDC42-204ENST00000411827 A0A0A0MQY5 61 aa5.61□□□□□ -1.51
CDC42-204ENST00000411827 KRTAP5-10Q6L8G5 202 aa5.6□□□□□ -1.51
CDC42-204ENST00000411827 KRTAP6-1Q3LI64 71 aa5.56□□□□□ -1.52
CDC42-204ENST00000411827 KRTAP20-2Q3LI61 65 aa5.45□□□□□ -1.54
CDC42-204ENST00000411827 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.55
CDC42-204ENST00000411827 KRTAP5-7Q6L8G8 165 aa5.38□□□□□ -1.55
CDC42-204ENST00000411827 MT3P25713 68 aa5.23□□□□□ -1.57
CDC42-204ENST00000411827 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
CDC42-204ENST00000411827 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
CDC42-204ENST00000411827 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
CDC42-204ENST00000411827 KRTAP5-8O75690 187 aa4.83□□□□□ -1.64
CDC42-204ENST00000411827 MUC5BQ9HC84 5762 aaPredicted RBP4.81□□□□□ -1.64
CDC42-204ENST00000411827 LCE1EQ5T753 118 aa4.79□□□□□ -1.64
CDC42-204ENST00000411827 AHNAKQ09666 5890 aaKnown RBP4.78□□□□□ -1.64
CDC42-204ENST00000411827 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
CDC42-204ENST00000411827 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
CDC42-204ENST00000411827 KRTAP5-11Q6L8G4 156 aa4.7□□□□□ -1.66
CDC42-204ENST00000411827 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
CDC42-204ENST00000411827 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
CDC42-204ENST00000411827 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.57□□□□□ -1.68
CDC42-204ENST00000411827 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
CDC42-204ENST00000411827 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
CDC42-204ENST00000411827 INE1O15225 51 aa4.36□□□□□ -1.71
CDC42-204ENST00000411827 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
CDC42-204ENST00000411827 LCE1BQ5T7P3 118 aa4.33□□□□□ -1.72
CDC42-204ENST00000411827 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
CDC42-204ENST00000411827 PRM1P04553 51 aa3.74□□□□□ -1.81
CDC42-204ENST00000411827 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
CDC42-204ENST00000411827 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
CDC42-204ENST00000411827 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
CDC42-204ENST00000411827 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
CDC42-204ENST00000411827 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 296.6 ms