RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
NOD1-202ENST00000411552 C10orf95Q9H7T3 257 aa6.11□□□□□ -1.43
NOD1-202ENST00000411552 MT1EP04732 61 aa6.07□□□□□ -1.44
NOD1-202ENST00000411552 V9GYY9 64 aa6.06□□□□□ -1.44
NOD1-202ENST00000411552 TNP1P09430 55 aa6.04□□□□□ -1.44
NOD1-202ENST00000411552 MIR22HGQ0VDD5 57 aa6.04□□□□□ -1.44
NOD1-202ENST00000411552 Q1T7F1 81 aa6.04□□□□□ -1.44
NOD1-202ENST00000411552 PSPHP1O15172 72 aa6.03□□□□□ -1.44
NOD1-202ENST00000411552 KRTAP19-5Q3LI72 72 aa6.03□□□□□ -1.44
NOD1-202ENST00000411552 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
NOD1-202ENST00000411552 KRTAP19-3Q7Z4W3 81 aa5.97□□□□□ -1.45
NOD1-202ENST00000411552 PCP4P48539 62 aa5.95□□□□□ -1.46
NOD1-202ENST00000411552 K7ERS5 55 aa5.87□□□□□ -1.47
NOD1-202ENST00000411552 RPS28P62857 69 aaKnown RBP5.86□□□□□ -1.47
NOD1-202ENST00000411552 MT1GP13640 62 aa5.84□□□□□ -1.47
NOD1-202ENST00000411552 A6NED7 52 aa5.83□□□□□ -1.48
NOD1-202ENST00000411552 MT1LQ93083 61 aa5.83□□□□□ -1.48
NOD1-202ENST00000411552 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
NOD1-202ENST00000411552 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
NOD1-202ENST00000411552 MT1MQ8N339 61 aa5.77□□□□□ -1.49
NOD1-202ENST00000411552 DSTQ03001 7570 aaKnown RBP5.77□□□□□ -1.49
NOD1-202ENST00000411552 GPR98Q8WXG9 6306 aa5.75□□□□□ -1.49
NOD1-202ENST00000411552 H3BS24 57 aa5.75□□□□□ -1.49
NOD1-202ENST00000411552 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
NOD1-202ENST00000411552 KRTAP4-3Q9BYR4 195 aa5.64□□□□□ -1.51
NOD1-202ENST00000411552 CDC42SE1Q9NRR8 79 aa5.6□□□□□ -1.51
NOD1-202ENST00000411552 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
NOD1-202ENST00000411552 ROMO1P60602 79 aa5.53□□□□□ -1.52
NOD1-202ENST00000411552 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
NOD1-202ENST00000411552 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
NOD1-202ENST00000411552 MT4P47944 62 aa5.38□□□□□ -1.55
NOD1-202ENST00000411552 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
NOD1-202ENST00000411552 KRTAP5-10Q6L8G5 202 aa5.33□□□□□ -1.56
NOD1-202ENST00000411552 AHNAK2Q8IVF2 5795 aa5.33□□□□□ -1.56
NOD1-202ENST00000411552 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
NOD1-202ENST00000411552 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
NOD1-202ENST00000411552 BRK1Q8WUW1 75 aa5.18□□□□□ -1.58
NOD1-202ENST00000411552 KRTAP5-7Q6L8G8 165 aa5.17□□□□□ -1.58
NOD1-202ENST00000411552 KRTAP20-2Q3LI61 65 aa5.08□□□□□ -1.6
NOD1-202ENST00000411552 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
NOD1-202ENST00000411552 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
NOD1-202ENST00000411552 KRTAP9-6A8MVA2 160 aa5.02□□□□□ -1.61
NOD1-202ENST00000411552 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
NOD1-202ENST00000411552 MT1AP04731 61 aa4.96□□□□□ -1.62
NOD1-202ENST00000411552 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
NOD1-202ENST00000411552 PMAIP1Q13794 54 aa4.87□□□□□ -1.63
NOD1-202ENST00000411552 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
NOD1-202ENST00000411552 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
NOD1-202ENST00000411552 PRAC1Q96KF2 57 aa4.68□□□□□ -1.66
NOD1-202ENST00000411552 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
NOD1-202ENST00000411552 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
NOD1-202ENST00000411552 MT3P25713 68 aa4.52□□□□□ -1.69
NOD1-202ENST00000411552 KRTAP5-8O75690 187 aa4.48□□□□□ -1.69
NOD1-202ENST00000411552 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
NOD1-202ENST00000411552 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
NOD1-202ENST00000411552 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
NOD1-202ENST00000411552 KRTAP5-11Q6L8G4 156 aa4.42□□□□□ -1.7
NOD1-202ENST00000411552 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
NOD1-202ENST00000411552 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
NOD1-202ENST00000411552 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
NOD1-202ENST00000411552 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
NOD1-202ENST00000411552 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
NOD1-202ENST00000411552 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
NOD1-202ENST00000411552 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
NOD1-202ENST00000411552 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
NOD1-202ENST00000411552 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
NOD1-202ENST00000411552 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
NOD1-202ENST00000411552 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
NOD1-202ENST00000411552 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
NOD1-202ENST00000411552 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
NOD1-202ENST00000411552 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
NOD1-202ENST00000411552 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
NOD1-202ENST00000411552 PRM1P04553 51 aa2.84□□□□□ -1.95
NOD1-202ENST00000411552 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
NOD1-202ENST00000411552 INE1O15225 51 aa2.62□□□□□ -1.99
NOD1-202ENST00000411552 A0A0A0MQY5 61 aa2.61□□□□□ -1.99
NOD1-202ENST00000411552 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
NOD1-202ENST00000411552 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 41 ms