RNA–Protein interactions for RNA: ENST00000410019.3

CDCA7-203, Transcript of cell division cycle associated 7, humanhuman

TSL 2 BASIC

Gene CDCA7, Length 1,488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-203ENST00000410019 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
CDCA7-203ENST00000410019 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
CDCA7-203ENST00000410019 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
CDCA7-203ENST00000410019 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
CDCA7-203ENST00000410019 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
CDCA7-203ENST00000410019 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
CDCA7-203ENST00000410019 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
CDCA7-203ENST00000410019 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
CDCA7-203ENST00000410019 KMT2DO14686 5537 aa5.48□□□□□ -1.53
CDCA7-203ENST00000410019 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.53
CDCA7-203ENST00000410019 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
CDCA7-203ENST00000410019 LUZP6Q538Z0 58 aa5.37□□□□□ -1.55
CDCA7-203ENST00000410019 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
CDCA7-203ENST00000410019 MT3P25713 68 aa5.32□□□□□ -1.56
CDCA7-203ENST00000410019 KRTAP5-9P26371 169 aa5.28□□□□□ -1.56
CDCA7-203ENST00000410019 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
CDCA7-203ENST00000410019 NDUFAF8A1L188 74 aa5.26□□□□□ -1.57
CDCA7-203ENST00000410019 KRTAP19-5Q3LI72 72 aa5.21□□□□□ -1.58
CDCA7-203ENST00000410019 NEBP20929 6669 aa5.21□□□□□ -1.58
CDCA7-203ENST00000410019 KRTAP19-7Q3SYF9 63 aa5.2□□□□□ -1.58
CDCA7-203ENST00000410019 SPRR2FQ96RM1 72 aa5.2□□□□□ -1.58
CDCA7-203ENST00000410019 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
CDCA7-203ENST00000410019 MT1EP04732 61 aa5.13□□□□□ -1.59
CDCA7-203ENST00000410019 MDN1Q9NU22 5596 aa5.09□□□□□ -1.59
CDCA7-203ENST00000410019 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
CDCA7-203ENST00000410019 KRTAP19-3Q7Z4W3 81 aa4.99□□□□□ -1.61
CDCA7-203ENST00000410019 SPRR2EP22531 72 aa4.98□□□□□ -1.61
CDCA7-203ENST00000410019 SPRR2BP35325 72 aa4.98□□□□□ -1.61
CDCA7-203ENST00000410019 SPRR2AP35326 72 aa4.98□□□□□ -1.61
CDCA7-203ENST00000410019 MT1LQ93083 61 aa4.98□□□□□ -1.61
CDCA7-203ENST00000410019 KRTAP20-1Q3LI63 56 aa4.97□□□□□ -1.61
CDCA7-203ENST00000410019 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
CDCA7-203ENST00000410019 MT1GP13640 62 aa4.95□□□□□ -1.62
CDCA7-203ENST00000410019 KRTAP5-11Q6L8G4 156 aa4.93□□□□□ -1.62
CDCA7-203ENST00000410019 MT1MQ8N339 61 aa4.84□□□□□ -1.63
CDCA7-203ENST00000410019 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
CDCA7-203ENST00000410019 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
CDCA7-203ENST00000410019 SPRR2DP22532 72 aa4.81□□□□□ -1.64
CDCA7-203ENST00000410019 LCE1FQ5T754 118 aa4.77□□□□□ -1.65
CDCA7-203ENST00000410019 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.77□□□□□ -1.65
CDCA7-203ENST00000410019 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
CDCA7-203ENST00000410019 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
CDCA7-203ENST00000410019 KRTAP2-1Q9BYU5 128 aa4.68□□□□□ -1.66
CDCA7-203ENST00000410019 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
CDCA7-203ENST00000410019 GPR98Q8WXG9 6306 aa4.53□□□□□ -1.68
CDCA7-203ENST00000410019 INE1O15225 51 aa4.46□□□□□ -1.7
CDCA7-203ENST00000410019 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
CDCA7-203ENST00000410019 KRTAP5-4Q6L8H1 288 aa4.36□□□□□ -1.71
CDCA7-203ENST00000410019 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
CDCA7-203ENST00000410019 MT1AP04731 61 aa4.24□□□□□ -1.73
CDCA7-203ENST00000410019 MT4P47944 62 aa4.21□□□□□ -1.74
CDCA7-203ENST00000410019 KRTAP6-1Q3LI64 71 aa4.18□□□□□ -1.74
CDCA7-203ENST00000410019 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
CDCA7-203ENST00000410019 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
CDCA7-203ENST00000410019 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
CDCA7-203ENST00000410019 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
CDCA7-203ENST00000410019 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
CDCA7-203ENST00000410019 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
CDCA7-203ENST00000410019 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
CDCA7-203ENST00000410019 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
CDCA7-203ENST00000410019 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
CDCA7-203ENST00000410019 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.8
CDCA7-203ENST00000410019 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.8
CDCA7-203ENST00000410019 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.82
CDCA7-203ENST00000410019 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
CDCA7-203ENST00000410019 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
CDCA7-203ENST00000410019 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
CDCA7-203ENST00000410019 PRM1P04553 51 aa3.35□□□□□ -1.87
CDCA7-203ENST00000410019 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
CDCA7-203ENST00000410019 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
CDCA7-203ENST00000410019 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
CDCA7-203ENST00000410019 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
CDCA7-203ENST00000410019 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
CDCA7-203ENST00000410019 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
CDCA7-203ENST00000410019 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
CDCA7-203ENST00000410019 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
CDCA7-203ENST00000410019 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 96.1 ms