RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 MT1FP04733 61 aa1.37□□□□□ -2.19
RGPD3-202ENST00000409886 CAMK2N1Q7Z7J9 78 aa1.37□□□□□ -2.19
RGPD3-202ENST00000409886 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
RGPD3-202ENST00000409886 SPRR2DP22532 72 aa1.35□□□□□ -2.19
RGPD3-202ENST00000409886 KRTAP19-4Q3LI73 84 aa1.35□□□□□ -2.19
RGPD3-202ENST00000409886 LCE3BQ5TA77 95 aa1.34□□□□□ -2.19
RGPD3-202ENST00000409886 KRTAP4-8Q9BYQ9 185 aa1.34□□□□□ -2.19
RGPD3-202ENST00000409886 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
RGPD3-202ENST00000409886 KRTAP4-2Q9BYR5 136 aa1.33□□□□□ -2.2
RGPD3-202ENST00000409886 KRTAP10-10P60014 251 aa1.32□□□□□ -2.2
RGPD3-202ENST00000409886 KRTAP4-7Q9BYR0 210 aa1.32□□□□□ -2.2
RGPD3-202ENST00000409886 KRTAP10-5P60370 271 aa1.31□□□□□ -2.2
RGPD3-202ENST00000409886 PLAC4Q8WY50 150 aa1.31□□□□□ -2.2
RGPD3-202ENST00000409886 LCE4AQ5TA78 99 aa1.3□□□□□ -2.2
RGPD3-202ENST00000409886 KRTAP5-3Q6L8H2 238 aa1.29□□□□□ -2.2
RGPD3-202ENST00000409886 KRTAP10-12P60413 245 aa1.29□□□□□ -2.2
RGPD3-202ENST00000409886 KRTAP4-12Q9BQ66 201 aa1.29□□□□□ -2.2
RGPD3-202ENST00000409886 KRTAP9-9Q9BYP9 154 aa1.29□□□□□ -2.2
RGPD3-202ENST00000409886 KRTAP9-4Q9BYQ2 154 aa1.29□□□□□ -2.2
RGPD3-202ENST00000409886 LUZP6Q538Z0 58 aa1.27□□□□□ -2.21
RGPD3-202ENST00000409886 KRTAP4-8A0A0G2JLE6 195 aa1.27□□□□□ -2.21
RGPD3-202ENST00000409886 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.27□□□□□ -2.21
RGPD3-202ENST00000409886 M0QZ58 72 aa1.26□□□□□ -2.21
RGPD3-202ENST00000409886 SPRR2FQ96RM1 72 aa1.25□□□□□ -2.21
RGPD3-202ENST00000409886 KRTAP19-8Q3LI54 63 aa1.24□□□□□ -2.21
RGPD3-202ENST00000409886 KRTAP10-7P60409 375 aaPredicted RBP1.23□□□□□ -2.21
RGPD3-202ENST00000409886 LCE1DQ5T752 114 aa1.23□□□□□ -2.21
RGPD3-202ENST00000409886 LCE3AQ5TA76 89 aa1.23□□□□□ -2.21
RGPD3-202ENST00000409886 HMCN1Q96RW7 5635 aa1.21□□□□□ -2.22
RGPD3-202ENST00000409886 R4GN34 69 aa1.21□□□□□ -2.22
RGPD3-202ENST00000409886 KRTAP5-4Q6L8H1 288 aa1.2□□□□□ -2.22
RGPD3-202ENST00000409886 MT1BP07438 61 aa1.2□□□□□ -2.22
RGPD3-202ENST00000409886 MT1XP80297 61 aa1.19□□□□□ -2.22
RGPD3-202ENST00000409886 KRTAP4-3Q9BYR4 195 aa1.19□□□□□ -2.22
RGPD3-202ENST00000409886 KRTAP8-1Q8IUC2 63 aa1.19□□□□□ -2.22
RGPD3-202ENST00000409886 KRTAP4-9Q9BYQ8 210 aa1.19□□□□□ -2.22
RGPD3-202ENST00000409886 KRTAP5-5Q701N2 237 aaPredicted RBP1.16□□□□□ -2.22
RGPD3-202ENST00000409886 SPRR2GQ9BYE4 73 aa1.16□□□□□ -2.22
RGPD3-202ENST00000409886 MT3P25713 68 aa1.16□□□□□ -2.22
RGPD3-202ENST00000409886 KRTAP23-1A1A580 65 aa1.14□□□□□ -2.23
RGPD3-202ENST00000409886 KRTAP19-7Q3SYF9 63 aa1.14□□□□□ -2.23
RGPD3-202ENST00000409886 MUC5ACP98088 5654 aa1.14□□□□□ -2.23
RGPD3-202ENST00000409886 PRO2289Q9P1D8 64 aa1.14□□□□□ -2.23
RGPD3-202ENST00000409886 PP632Q6XCG6 107 aa1.1□□□□□ -2.23
RGPD3-202ENST00000409886 LCE5AQ5TCM9 118 aa1.09□□□□□ -2.23
RGPD3-202ENST00000409886 MT4P47944 62 aa1.09□□□□□ -2.23
RGPD3-202ENST00000409886 KRTAP19-5Q3LI72 72 aa1.09□□□□□ -2.24
RGPD3-202ENST00000409886 KRTAP12-3P60328 96 aa1.08□□□□□ -2.24
RGPD3-202ENST00000409886 KRTAP20-2Q3LI61 65 aa1.07□□□□□ -2.24
RGPD3-202ENST00000409886 TNP1P09430 55 aa1.04□□□□□ -2.24
RGPD3-202ENST00000409886 KRTAP5-8O75690 187 aa1.04□□□□□ -2.24
RGPD3-202ENST00000409886 KRTAP4-11Q9BYQ6 195 aa1.04□□□□□ -2.24
RGPD3-202ENST00000409886 LCE1EQ5T753 118 aa1.03□□□□□ -2.24
RGPD3-202ENST00000409886 KRTAP19-3Q7Z4W3 81 aa1.03□□□□□ -2.24
RGPD3-202ENST00000409886 LCE3CQ5T5A8 94 aa1.01□□□□□ -2.25
RGPD3-202ENST00000409886 MT1GP13640 62 aa1□□□□□ -2.25
RGPD3-202ENST00000409886 KRTAP12-4P60329 112 aa1□□□□□ -2.25
RGPD3-202ENST00000409886 MT1LQ93083 61 aa0.99□□□□□ -2.25
RGPD3-202ENST00000409886 MT1EP04732 61 aa0.97□□□□□ -2.25
RGPD3-202ENST00000409886 INE1O15225 51 aa0.94□□□□□ -2.26
RGPD3-202ENST00000409886 KRTAP5-1Q6L8H4 278 aa0.94□□□□□ -2.26
RGPD3-202ENST00000409886 MT1MQ8N339 61 aa0.94□□□□□ -2.26
RGPD3-202ENST00000409886 KRTAP6-1Q3LI64 71 aa0.93□□□□□ -2.26
RGPD3-202ENST00000409886 PRM1P04553 51 aa0.89□□□□□ -2.27
RGPD3-202ENST00000409886 KRTAP4-4Q9BYR3 166 aa0.89□□□□□ -2.27
RGPD3-202ENST00000409886 LCE1FQ5T754 118 aa0.87□□□□□ -2.27
RGPD3-202ENST00000409886 KRTAP5-11Q6L8G4 156 aa0.85□□□□□ -2.27
RGPD3-202ENST00000409886 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
RGPD3-202ENST00000409886 MT1AP04731 61 aa0.78□□□□□ -2.28
RGPD3-202ENST00000409886 LCE3EQ5T5B0 92 aa0.77□□□□□ -2.29
RGPD3-202ENST00000409886 LCE3DQ9BYE3 92 aa0.77□□□□□ -2.29
RGPD3-202ENST00000409886 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
RGPD3-202ENST00000409886 LCE1CQ5T751 118 aa0.72□□□□□ -2.29
RGPD3-202ENST00000409886 LCE1BQ5T7P3 118 aa0.72□□□□□ -2.29
RGPD3-202ENST00000409886 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
RGPD3-202ENST00000409886 KRTAP21-2Q3LI59 83 aa0.66□□□□□ -2.3
RGPD3-202ENST00000409886 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 71.4 ms