RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 KRTAP10-10P60014 251 aa2.07□□□□□ -2.08
R3HDM1-203ENST00000409606 KRTAP10-12P60413 245 aa2.06□□□□□ -2.08
R3HDM1-203ENST00000409606 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
R3HDM1-203ENST00000409606 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
R3HDM1-203ENST00000409606 KRTAP4-9Q9BYQ8 210 aa2.05□□□□□ -2.08
R3HDM1-203ENST00000409606 FSIP2Q5CZC0 6907 aa2.04□□□□□ -2.08
R3HDM1-203ENST00000409606 FCGBPQ9Y6R7 5405 aaPredicted RBP2.01□□□□□ -2.09
R3HDM1-203ENST00000409606 INE1O15225 51 aa1.99□□□□□ -2.09
R3HDM1-203ENST00000409606 LCE1AQ5T7P2 110 aa1.98□□□□□ -2.09
R3HDM1-203ENST00000409606 PP632Q6XCG6 107 aa1.93□□□□□ -2.1
R3HDM1-203ENST00000409606 SPRR2EP22531 72 aa1.93□□□□□ -2.1
R3HDM1-203ENST00000409606 SPRR2BP35325 72 aa1.93□□□□□ -2.1
R3HDM1-203ENST00000409606 SPRR2AP35326 72 aa1.93□□□□□ -2.1
R3HDM1-203ENST00000409606 KRTAP4-11Q9BYQ6 195 aa1.92□□□□□ -2.1
R3HDM1-203ENST00000409606 KRTAP10-7P60409 375 aaPredicted RBP1.92□□□□□ -2.1
R3HDM1-203ENST00000409606 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
R3HDM1-203ENST00000409606 KRTAP8-1Q8IUC2 63 aa1.9□□□□□ -2.1
R3HDM1-203ENST00000409606 MACF1Q9UPN3 7388 aaKnown RBP1.9□□□□□ -2.11
R3HDM1-203ENST00000409606 SPRR2DP22532 72 aa1.89□□□□□ -2.11
R3HDM1-203ENST00000409606 KRTAP19-7Q3SYF9 63 aa1.89□□□□□ -2.11
R3HDM1-203ENST00000409606 SYNE2Q8WXH0 6885 aaKnown RBP1.87□□□□□ -2.11
R3HDM1-203ENST00000409606 TNP1P09430 55 aa1.86□□□□□ -2.11
R3HDM1-203ENST00000409606 KMT2DO14686 5537 aa1.86□□□□□ -2.11
R3HDM1-203ENST00000409606 LCE5AQ5TCM9 118 aa1.85□□□□□ -2.11
R3HDM1-203ENST00000409606 SPRR2FQ96RM1 72 aa1.83□□□□□ -2.12
R3HDM1-203ENST00000409606 MT1EP04732 61 aa1.83□□□□□ -2.12
R3HDM1-203ENST00000409606 LCE4AQ5TA78 99 aa1.82□□□□□ -2.12
R3HDM1-203ENST00000409606 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
R3HDM1-203ENST00000409606 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
R3HDM1-203ENST00000409606 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
R3HDM1-203ENST00000409606 MUC12Q9UKN1 5478 aa1.8□□□□□ -2.12
R3HDM1-203ENST00000409606 LCE3AQ5TA76 89 aa1.79□□□□□ -2.12
R3HDM1-203ENST00000409606 MT1LQ93083 61 aa1.77□□□□□ -2.13
R3HDM1-203ENST00000409606 KRTAP19-5Q3LI72 72 aa1.76□□□□□ -2.13
R3HDM1-203ENST00000409606 MT3P25713 68 aa1.75□□□□□ -2.13
R3HDM1-203ENST00000409606 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
R3HDM1-203ENST00000409606 KRTAP5-5Q701N2 237 aaPredicted RBP1.74□□□□□ -2.13
R3HDM1-203ENST00000409606 KRTAP19-3Q7Z4W3 81 aa1.73□□□□□ -2.13
R3HDM1-203ENST00000409606 MT1GP13640 62 aa1.71□□□□□ -2.14
R3HDM1-203ENST00000409606 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
R3HDM1-203ENST00000409606 MT1MQ8N339 61 aa1.7□□□□□ -2.14
R3HDM1-203ENST00000409606 MDN1Q9NU22 5596 aa1.7□□□□□ -2.14
R3HDM1-203ENST00000409606 KRTAP5-4Q6L8H1 288 aa1.69□□□□□ -2.14
R3HDM1-203ENST00000409606 LCE3CQ5T5A8 94 aa1.67□□□□□ -2.14
R3HDM1-203ENST00000409606 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
R3HDM1-203ENST00000409606 KRTAP9-6A8MVA2 160 aa1.64□□□□□ -2.15
R3HDM1-203ENST00000409606 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
R3HDM1-203ENST00000409606 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
R3HDM1-203ENST00000409606 LCE1FQ5T754 118 aa1.61□□□□□ -2.15
R3HDM1-203ENST00000409606 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
R3HDM1-203ENST00000409606 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
R3HDM1-203ENST00000409606 KRTAP5-2Q701N4 177 aa1.55□□□□□ -2.16
R3HDM1-203ENST00000409606 KRTAP4-3Q9BYR4 195 aa1.55□□□□□ -2.16
R3HDM1-203ENST00000409606 MT4P47944 62 aa1.53□□□□□ -2.16
R3HDM1-203ENST00000409606 LCE1EQ5T753 118 aa1.52□□□□□ -2.17
R3HDM1-203ENST00000409606 SYNE1Q8NF91 8797 aaKnown RBP1.52□□□□□ -2.17
R3HDM1-203ENST00000409606 MT1AP04731 61 aa1.52□□□□□ -2.17
R3HDM1-203ENST00000409606 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
R3HDM1-203ENST00000409606 KRTAP20-2Q3LI61 65 aa1.49□□□□□ -2.17
R3HDM1-203ENST00000409606 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
R3HDM1-203ENST00000409606 DSTQ03001 7570 aaKnown RBP1.46□□□□□ -2.18
R3HDM1-203ENST00000409606 KRTAP6-1Q3LI64 71 aa1.45□□□□□ -2.18
R3HDM1-203ENST00000409606 LCE3EQ5T5B0 92 aa1.41□□□□□ -2.18
R3HDM1-203ENST00000409606 MUC5ACP98088 5654 aa1.4□□□□□ -2.18
R3HDM1-203ENST00000409606 KRTAP5-8O75690 187 aa1.37□□□□□ -2.19
R3HDM1-203ENST00000409606 LCE3DQ9BYE3 92 aa1.33□□□□□ -2.2
R3HDM1-203ENST00000409606 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
R3HDM1-203ENST00000409606 KRTAP5-1Q6L8H4 278 aa1.28□□□□□ -2.2
R3HDM1-203ENST00000409606 KRTAP5-11Q6L8G4 156 aa1.26□□□□□ -2.21
R3HDM1-203ENST00000409606 PRM1P04553 51 aa1.22□□□□□ -2.21
R3HDM1-203ENST00000409606 LCE1CQ5T751 118 aa1.22□□□□□ -2.21
R3HDM1-203ENST00000409606 LCE1BQ5T7P3 118 aa1.22□□□□□ -2.21
R3HDM1-203ENST00000409606 KRTAP4-4Q9BYR3 166 aa1.21□□□□□ -2.22
R3HDM1-203ENST00000409606 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
R3HDM1-203ENST00000409606 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
R3HDM1-203ENST00000409606 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
R3HDM1-203ENST00000409606 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 119.5 ms