RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
CHRNA1-205ENST00000409542 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
CHRNA1-205ENST00000409542 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
CHRNA1-205ENST00000409542 CAMK2N1Q7Z7J9 78 aa5.32□□□□□ -1.56
CHRNA1-205ENST00000409542 KRTAP8-1Q8IUC2 63 aa5.31□□□□□ -1.56
CHRNA1-205ENST00000409542 SPRR2DP22532 72 aa5.3□□□□□ -1.56
CHRNA1-205ENST00000409542 MT1XP80297 61 aa5.3□□□□□ -1.56
CHRNA1-205ENST00000409542 KRTAP4-8A0A0G2JLE6 195 aa5.24□□□□□ -1.57
CHRNA1-205ENST00000409542 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
CHRNA1-205ENST00000409542 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
CHRNA1-205ENST00000409542 PRO2289Q9P1D8 64 aa5.21□□□□□ -1.58
CHRNA1-205ENST00000409542 PLAC4Q8WY50 150 aa5.15□□□□□ -1.58
CHRNA1-205ENST00000409542 TNP1P09430 55 aa5.14□□□□□ -1.59
CHRNA1-205ENST00000409542 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
CHRNA1-205ENST00000409542 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
CHRNA1-205ENST00000409542 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
CHRNA1-205ENST00000409542 KRTAP10-12P60413 245 aa5□□□□□ -1.61
CHRNA1-205ENST00000409542 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
CHRNA1-205ENST00000409542 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
CHRNA1-205ENST00000409542 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
CHRNA1-205ENST00000409542 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
CHRNA1-205ENST00000409542 NDUFAF8A1L188 74 aa4.94□□□□□ -1.62
CHRNA1-205ENST00000409542 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
CHRNA1-205ENST00000409542 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
CHRNA1-205ENST00000409542 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
CHRNA1-205ENST00000409542 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
CHRNA1-205ENST00000409542 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
CHRNA1-205ENST00000409542 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
CHRNA1-205ENST00000409542 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
CHRNA1-205ENST00000409542 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.66
CHRNA1-205ENST00000409542 MT1EP04732 61 aa4.71□□□□□ -1.66
CHRNA1-205ENST00000409542 MT4P47944 62 aa4.69□□□□□ -1.66
CHRNA1-205ENST00000409542 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.66
CHRNA1-205ENST00000409542 KRTAP12-3P60328 96 aa4.65□□□□□ -1.66
CHRNA1-205ENST00000409542 KRTAP5-10Q6L8G5 202 aa4.64□□□□□ -1.67
CHRNA1-205ENST00000409542 MT1GP13640 62 aa4.56□□□□□ -1.68
CHRNA1-205ENST00000409542 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
CHRNA1-205ENST00000409542 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
CHRNA1-205ENST00000409542 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
CHRNA1-205ENST00000409542 MT1MQ8N339 61 aa4.51□□□□□ -1.69
CHRNA1-205ENST00000409542 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
CHRNA1-205ENST00000409542 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
CHRNA1-205ENST00000409542 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
CHRNA1-205ENST00000409542 MT1LQ93083 61 aa4.43□□□□□ -1.7
CHRNA1-205ENST00000409542 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
CHRNA1-205ENST00000409542 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
CHRNA1-205ENST00000409542 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
CHRNA1-205ENST00000409542 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
CHRNA1-205ENST00000409542 INE1O15225 51 aa4.11□□□□□ -1.75
CHRNA1-205ENST00000409542 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
CHRNA1-205ENST00000409542 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
CHRNA1-205ENST00000409542 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
CHRNA1-205ENST00000409542 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
CHRNA1-205ENST00000409542 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
CHRNA1-205ENST00000409542 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
CHRNA1-205ENST00000409542 AHNAKQ09666 5890 aaKnown RBP3.85□□□□□ -1.79
CHRNA1-205ENST00000409542 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
CHRNA1-205ENST00000409542 MT3P25713 68 aa3.79□□□□□ -1.8
CHRNA1-205ENST00000409542 MT1AP04731 61 aa3.75□□□□□ -1.81
CHRNA1-205ENST00000409542 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
CHRNA1-205ENST00000409542 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
CHRNA1-205ENST00000409542 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
CHRNA1-205ENST00000409542 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
CHRNA1-205ENST00000409542 LCE1EQ5T753 118 aa3.34□□□□□ -1.88
CHRNA1-205ENST00000409542 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.88
CHRNA1-205ENST00000409542 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
CHRNA1-205ENST00000409542 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
CHRNA1-205ENST00000409542 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
CHRNA1-205ENST00000409542 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
CHRNA1-205ENST00000409542 PRM1P04553 51 aa3.03□□□□□ -1.92
CHRNA1-205ENST00000409542 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
CHRNA1-205ENST00000409542 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
CHRNA1-205ENST00000409542 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
CHRNA1-205ENST00000409542 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
CHRNA1-205ENST00000409542 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
CHRNA1-205ENST00000409542 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
CHRNA1-205ENST00000409542 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 32.9 ms