RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
TSPAN4-208ENST00000409531 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
TSPAN4-208ENST00000409531 SPRR2DP22532 72 aa6.22□□□□□ -1.41
TSPAN4-208ENST00000409531 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
TSPAN4-208ENST00000409531 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
TSPAN4-208ENST00000409531 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
TSPAN4-208ENST00000409531 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
TSPAN4-208ENST00000409531 MT1EP04732 61 aa6.06□□□□□ -1.44
TSPAN4-208ENST00000409531 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
TSPAN4-208ENST00000409531 SVIPQ8NHG7 77 aa5.98□□□□□ -1.45
TSPAN4-208ENST00000409531 LCE5AQ5TCM9 118 aa5.94□□□□□ -1.46
TSPAN4-208ENST00000409531 KRTAP19-3Q7Z4W3 81 aa5.94□□□□□ -1.46
TSPAN4-208ENST00000409531 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
TSPAN4-208ENST00000409531 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.47
TSPAN4-208ENST00000409531 MT1LQ93083 61 aa5.89□□□□□ -1.47
TSPAN4-208ENST00000409531 MT1GP13640 62 aa5.86□□□□□ -1.47
TSPAN4-208ENST00000409531 KTN1-AS1Q86SY8 53 aa5.86□□□□□ -1.47
TSPAN4-208ENST00000409531 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
TSPAN4-208ENST00000409531 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
TSPAN4-208ENST00000409531 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
TSPAN4-208ENST00000409531 MT1MQ8N339 61 aa5.74□□□□□ -1.49
TSPAN4-208ENST00000409531 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
TSPAN4-208ENST00000409531 HMCN1Q96RW7 5635 aa5.63□□□□□ -1.51
TSPAN4-208ENST00000409531 LCE3CQ5T5A8 94 aa5.62□□□□□ -1.51
TSPAN4-208ENST00000409531 AHNAK2Q8IVF2 5795 aa5.6□□□□□ -1.51
TSPAN4-208ENST00000409531 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
TSPAN4-208ENST00000409531 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
TSPAN4-208ENST00000409531 MT4P47944 62 aa5.53□□□□□ -1.52
TSPAN4-208ENST00000409531 KRTAP5-10Q6L8G5 202 aa5.51□□□□□ -1.53
TSPAN4-208ENST00000409531 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
TSPAN4-208ENST00000409531 KRTAP5-4Q6L8H1 288 aa5.37□□□□□ -1.55
TSPAN4-208ENST00000409531 KRTAP5-7Q6L8G8 165 aa5.36□□□□□ -1.55
TSPAN4-208ENST00000409531 KRTAP4-6Q9BYQ5 205 aa5.31□□□□□ -1.56
TSPAN4-208ENST00000409531 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
TSPAN4-208ENST00000409531 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
TSPAN4-208ENST00000409531 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
TSPAN4-208ENST00000409531 KRTAP9-6A8MVA2 160 aa5.23□□□□□ -1.57
TSPAN4-208ENST00000409531 KRTAP5-5Q701N2 237 aaPredicted RBP5.22□□□□□ -1.57
TSPAN4-208ENST00000409531 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
TSPAN4-208ENST00000409531 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
TSPAN4-208ENST00000409531 KRTAP20-2Q3LI61 65 aa5.04□□□□□ -1.6
TSPAN4-208ENST00000409531 MT1AP04731 61 aa5.03□□□□□ -1.6
TSPAN4-208ENST00000409531 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
TSPAN4-208ENST00000409531 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
TSPAN4-208ENST00000409531 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
TSPAN4-208ENST00000409531 AHNAKQ09666 5890 aaKnown RBP4.76□□□□□ -1.65
TSPAN4-208ENST00000409531 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
TSPAN4-208ENST00000409531 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
TSPAN4-208ENST00000409531 MUC5ACP98088 5654 aa4.7□□□□□ -1.66
TSPAN4-208ENST00000409531 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
TSPAN4-208ENST00000409531 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
TSPAN4-208ENST00000409531 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
TSPAN4-208ENST00000409531 MT3P25713 68 aa4.6□□□□□ -1.67
TSPAN4-208ENST00000409531 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
TSPAN4-208ENST00000409531 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
TSPAN4-208ENST00000409531 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
TSPAN4-208ENST00000409531 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.73
TSPAN4-208ENST00000409531 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
TSPAN4-208ENST00000409531 H3BS24 57 aa4.2□□□□□ -1.74
TSPAN4-208ENST00000409531 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
TSPAN4-208ENST00000409531 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
TSPAN4-208ENST00000409531 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
TSPAN4-208ENST00000409531 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
TSPAN4-208ENST00000409531 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
TSPAN4-208ENST00000409531 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
TSPAN4-208ENST00000409531 INE1O15225 51 aa3.71□□□□□ -1.81
TSPAN4-208ENST00000409531 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
TSPAN4-208ENST00000409531 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
TSPAN4-208ENST00000409531 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
TSPAN4-208ENST00000409531 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
TSPAN4-208ENST00000409531 PRM1P04553 51 aa3.3□□□□□ -1.88
TSPAN4-208ENST00000409531 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
TSPAN4-208ENST00000409531 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
TSPAN4-208ENST00000409531 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
TSPAN4-208ENST00000409531 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
TSPAN4-208ENST00000409531 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
TSPAN4-208ENST00000409531 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms