RNA–Protein interactions for RNA: ENST00000409127.1

CCDC115-202, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2 BASIC

Gene CCDC115, Length 1,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-202ENST00000409127 LCE5AQ5TCM9 118 aa7.98□□□□□ -1.13
CCDC115-202ENST00000409127 KRTAP25-1Q3LHN0 102 aa7.94□□□□□ -1.14
CCDC115-202ENST00000409127 MT1GP13640 62 aa7.9□□□□□ -1.14
CCDC115-202ENST00000409127 PP632Q6XCG6 107 aa7.9□□□□□ -1.14
CCDC115-202ENST00000409127 MT1LQ93083 61 aa7.8□□□□□ -1.16
CCDC115-202ENST00000409127 KRTAP12-3P60328 96 aa7.77□□□□□ -1.17
CCDC115-202ENST00000409127 CDC42SE1Q9NRR8 79 aa7.74□□□□□ -1.17
CCDC115-202ENST00000409127 MT1MQ8N339 61 aa7.7□□□□□ -1.18
CCDC115-202ENST00000409127 KRTAP23-1A1A580 65 aa7.66□□□□□ -1.18
CCDC115-202ENST00000409127 DSTQ03001 7570 aaKnown RBP7.65□□□□□ -1.19
CCDC115-202ENST00000409127 ROMO1P60602 79 aa7.61□□□□□ -1.19
CCDC115-202ENST00000409127 KRTAP19-4Q3LI73 84 aa7.46□□□□□ -1.22
CCDC115-202ENST00000409127 KRTAP4-3Q9BYR4 195 aa7.45□□□□□ -1.22
CCDC115-202ENST00000409127 KRTAP4-7Q9BYR0 210 aa7.37□□□□□ -1.23
CCDC115-202ENST00000409127 KRTAP15-1Q3LI76 137 aa7.36□□□□□ -1.23
CCDC115-202ENST00000409127 LCE4AQ5TA78 99 aa7.34□□□□□ -1.23
CCDC115-202ENST00000409127 KRTAP4-9Q9BYQ8 210 aa7.32□□□□□ -1.24
CCDC115-202ENST00000409127 LCE1DQ5T752 114 aa7.19□□□□□ -1.26
CCDC115-202ENST00000409127 MT4P47944 62 aa7.18□□□□□ -1.26
CCDC115-202ENST00000409127 KRTAP5-4Q6L8H1 288 aa7.18□□□□□ -1.26
CCDC115-202ENST00000409127 BRK1Q8WUW1 75 aa7.18□□□□□ -1.26
CCDC115-202ENST00000409127 LCE3CQ5T5A8 94 aa7.17□□□□□ -1.26
CCDC115-202ENST00000409127 KRTAP5-5Q701N2 237 aaPredicted RBP7.01□□□□□ -1.29
CCDC115-202ENST00000409127 HMCN1Q96RW7 5635 aa6.99□□□□□ -1.29
CCDC115-202ENST00000409127 LOC100996750A0A140TA64 210 aa6.97□□□□□ -1.29
CCDC115-202ENST00000409127 KRTAP4-6Q9BYQ5 205 aa6.96□□□□□ -1.3
CCDC115-202ENST00000409127 KRTAP12-4P60329 112 aa6.91□□□□□ -1.3
CCDC115-202ENST00000409127 GPR98Q8WXG9 6306 aa6.84□□□□□ -1.31
CCDC115-202ENST00000409127 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
CCDC115-202ENST00000409127 PMAIP1Q13794 54 aa6.8□□□□□ -1.32
CCDC115-202ENST00000409127 KRTAP20-2Q3LI61 65 aa6.76□□□□□ -1.33
CCDC115-202ENST00000409127 MT1AP04731 61 aa6.66□□□□□ -1.34
CCDC115-202ENST00000409127 KRTAP9-6A8MVA2 160 aa6.64□□□□□ -1.35
CCDC115-202ENST00000409127 SYNE1Q8NF91 8797 aaKnown RBP6.61□□□□□ -1.35
CCDC115-202ENST00000409127 AHNAK2Q8IVF2 5795 aa6.57□□□□□ -1.36
CCDC115-202ENST00000409127 KRTAP6-1Q3LI64 71 aa6.55□□□□□ -1.36
CCDC115-202ENST00000409127 KRTAP5-10Q6L8G5 202 aa6.53□□□□□ -1.36
CCDC115-202ENST00000409127 KRTAP5-3Q6L8H2 238 aa6.53□□□□□ -1.36
CCDC115-202ENST00000409127 PRO0628Q9UI54 55 aa6.47□□□□□ -1.37
CCDC115-202ENST00000409127 KRTAP9-4Q9BYQ2 154 aa6.42□□□□□ -1.38
CCDC115-202ENST00000409127 PRAC1Q96KF2 57 aa6.38□□□□□ -1.39
CCDC115-202ENST00000409127 KRTAP5-2Q701N4 177 aa6.32□□□□□ -1.4
CCDC115-202ENST00000409127 KRTAP5-7Q6L8G8 165 aa6.27□□□□□ -1.41
CCDC115-202ENST00000409127 KRTAP6-2Q3LI66 62 aa6.25□□□□□ -1.41
CCDC115-202ENST00000409127 MT3P25713 68 aa6.14□□□□□ -1.43
CCDC115-202ENST00000409127 KTN1-AS1Q86SY8 53 aa6.14□□□□□ -1.43
CCDC115-202ENST00000409127 KRTAP4-11Q9BYQ6 195 aa6.13□□□□□ -1.43
CCDC115-202ENST00000409127 SVIPQ8NHG7 77 aa5.9□□□□□ -1.46
CCDC115-202ENST00000409127 KRTAP5-8O75690 187 aa5.88□□□□□ -1.47
CCDC115-202ENST00000409127 OBSCNQ5VST9 7968 aa5.79□□□□□ -1.48
CCDC115-202ENST00000409127 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
CCDC115-202ENST00000409127 KRTAP5-1Q6L8H4 278 aa5.61□□□□□ -1.51
CCDC115-202ENST00000409127 LCE1EQ5T753 118 aa5.56□□□□□ -1.52
CCDC115-202ENST00000409127 LUZP6Q538Z0 58 aa5.55□□□□□ -1.52
CCDC115-202ENST00000409127 MUC5ACP98088 5654 aa5.43□□□□□ -1.54
CCDC115-202ENST00000409127 MUC5BQ9HC84 5762 aaPredicted RBP5.41□□□□□ -1.54
CCDC115-202ENST00000409127 H3BS24 57 aa5.39□□□□□ -1.55
CCDC115-202ENST00000409127 AHNAKQ09666 5890 aaKnown RBP5.35□□□□□ -1.55
CCDC115-202ENST00000409127 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
CCDC115-202ENST00000409127 LCE1BQ5T7P3 118 aa5.2□□□□□ -1.58
CCDC115-202ENST00000409127 LCE1CQ5T751 118 aa5.14□□□□□ -1.59
CCDC115-202ENST00000409127 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
CCDC115-202ENST00000409127 LCE3EQ5T5B0 92 aa4.99□□□□□ -1.61
CCDC115-202ENST00000409127 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.69□□□□□ -1.66
CCDC115-202ENST00000409127 KRTAP5-11Q6L8G4 156 aa4.61□□□□□ -1.67
CCDC115-202ENST00000409127 KRTAP4-12Q9BQ66 201 aa4.57□□□□□ -1.68
CCDC115-202ENST00000409127 NDUFAF8A1L188 74 aa4.56□□□□□ -1.68
CCDC115-202ENST00000409127 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
CCDC115-202ENST00000409127 KRTAP21-2Q3LI59 83 aa4.31□□□□□ -1.72
CCDC115-202ENST00000409127 PHGR1C9JFL3 82 aa3.97□□□□□ -1.77
CCDC115-202ENST00000409127 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
CCDC115-202ENST00000409127 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
CCDC115-202ENST00000409127 PRM1P04553 51 aa3.86□□□□□ -1.79
CCDC115-202ENST00000409127 INE1O15225 51 aa3.78□□□□□ -1.8
CCDC115-202ENST00000409127 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
CCDC115-202ENST00000409127 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
CCDC115-202ENST00000409127 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 70.2 ms