RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
APOBEC3B-204ENST00000407298 KRTAP12-1P59990 96 aa4.5□□□□□ -1.69
APOBEC3B-204ENST00000407298 AHNAK2Q8IVF2 5795 aa4.49□□□□□ -1.69
APOBEC3B-204ENST00000407298 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
APOBEC3B-204ENST00000407298 SPINT4Q6UDR6 99 aa4.46□□□□□ -1.7
APOBEC3B-204ENST00000407298 A0A1B0GU69 56 aa4.45□□□□□ -1.7
APOBEC3B-204ENST00000407298 A8MU10 97 aa4.42□□□□□ -1.7
APOBEC3B-204ENST00000407298 ATP5EP56381 51 aaPredicted RBP4.4□□□□□ -1.71
APOBEC3B-204ENST00000407298 KRTAP19-5Q3LI72 72 aa4.4□□□□□ -1.71
APOBEC3B-204ENST00000407298 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
APOBEC3B-204ENST00000407298 SMIM26A0A096LP01 95 aa4.38□□□□□ -1.71
APOBEC3B-204ENST00000407298 KRTAP5-7Q6L8G8 165 aa4.38□□□□□ -1.71
APOBEC3B-204ENST00000407298 MT1MQ8N339 61 aa4.38□□□□□ -1.71
APOBEC3B-204ENST00000407298 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
APOBEC3B-204ENST00000407298 MT1LQ93083 61 aa4.32□□□□□ -1.72
APOBEC3B-204ENST00000407298 TMEM258P61165 79 aa4.31□□□□□ -1.72
APOBEC3B-204ENST00000407298 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
APOBEC3B-204ENST00000407298 PRR15LQ9BU68 103 aa4.29□□□□□ -1.72
APOBEC3B-204ENST00000407298 LCE3AQ5TA76 89 aa4.26□□□□□ -1.73
APOBEC3B-204ENST00000407298 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
APOBEC3B-204ENST00000407298 TNP1P09430 55 aa4.21□□□□□ -1.74
APOBEC3B-204ENST00000407298 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
APOBEC3B-204ENST00000407298 UQCR11O14957 56 aa4.18□□□□□ -1.74
APOBEC3B-204ENST00000407298 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
APOBEC3B-204ENST00000407298 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
APOBEC3B-204ENST00000407298 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
APOBEC3B-204ENST00000407298 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
APOBEC3B-204ENST00000407298 MIR22HGQ0VDD5 57 aa4.1□□□□□ -1.75
APOBEC3B-204ENST00000407298 KRTAP12-3P60328 96 aa4.07□□□□□ -1.76
APOBEC3B-204ENST00000407298 PSPHP1O15172 72 aa4.05□□□□□ -1.76
APOBEC3B-204ENST00000407298 Q1T7F1 81 aa4.04□□□□□ -1.76
APOBEC3B-204ENST00000407298 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
APOBEC3B-204ENST00000407298 V9GYY9 64 aa4.02□□□□□ -1.77
APOBEC3B-204ENST00000407298 KRTAP25-1Q3LHN0 102 aa4.01□□□□□ -1.77
APOBEC3B-204ENST00000407298 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
APOBEC3B-204ENST00000407298 K7ERS5 55 aa3.94□□□□□ -1.78
APOBEC3B-204ENST00000407298 PCP4P48539 62 aa3.91□□□□□ -1.78
APOBEC3B-204ENST00000407298 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
APOBEC3B-204ENST00000407298 A6NED7 52 aa3.88□□□□□ -1.79
APOBEC3B-204ENST00000407298 MT3P25713 68 aa3.87□□□□□ -1.79
APOBEC3B-204ENST00000407298 RPS28P62857 69 aaKnown RBP3.83□□□□□ -1.8
APOBEC3B-204ENST00000407298 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
APOBEC3B-204ENST00000407298 SVIPQ8NHG7 77 aa3.81□□□□□ -1.8
APOBEC3B-204ENST00000407298 CDC42SE1Q9NRR8 79 aa3.79□□□□□ -1.8
APOBEC3B-204ENST00000407298 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
APOBEC3B-204ENST00000407298 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
APOBEC3B-204ENST00000407298 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
APOBEC3B-204ENST00000407298 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
APOBEC3B-204ENST00000407298 ROMO1P60602 79 aa3.75□□□□□ -1.81
APOBEC3B-204ENST00000407298 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
APOBEC3B-204ENST00000407298 MT1AP04731 61 aa3.67□□□□□ -1.82
APOBEC3B-204ENST00000407298 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
APOBEC3B-204ENST00000407298 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
APOBEC3B-204ENST00000407298 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
APOBEC3B-204ENST00000407298 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
APOBEC3B-204ENST00000407298 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
APOBEC3B-204ENST00000407298 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
APOBEC3B-204ENST00000407298 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
APOBEC3B-204ENST00000407298 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
APOBEC3B-204ENST00000407298 BRK1Q8WUW1 75 aa3.35□□□□□ -1.87
APOBEC3B-204ENST00000407298 PMAIP1Q13794 54 aa3.13□□□□□ -1.91
APOBEC3B-204ENST00000407298 PRAC1Q96KF2 57 aa3.09□□□□□ -1.91
APOBEC3B-204ENST00000407298 PRO0628Q9UI54 55 aa3.07□□□□□ -1.92
APOBEC3B-204ENST00000407298 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
APOBEC3B-204ENST00000407298 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
APOBEC3B-204ENST00000407298 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
APOBEC3B-204ENST00000407298 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
APOBEC3B-204ENST00000407298 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
APOBEC3B-204ENST00000407298 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
APOBEC3B-204ENST00000407298 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
APOBEC3B-204ENST00000407298 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
APOBEC3B-204ENST00000407298 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
APOBEC3B-204ENST00000407298 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
APOBEC3B-204ENST00000407298 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
APOBEC3B-204ENST00000407298 PRM1P04553 51 aa1.94□□□□□ -2.1
APOBEC3B-204ENST00000407298 INE1O15225 51 aa1.85□□□□□ -2.11
APOBEC3B-204ENST00000407298 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 102.8 ms