RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 SPATA8Q6RVD6 105 aa2.52□□□□□ -2.01
RPA3-204ENST00000406109 A0A0D9SG42 100 aa2.51□□□□□ -2.01
RPA3-204ENST00000406109 TMEM258P61165 79 aa2.5□□□□□ -2.01
RPA3-204ENST00000406109 PCP4P48539 62 aa2.48□□□□□ -2.01
RPA3-204ENST00000406109 SPINT4Q6UDR6 99 aa2.48□□□□□ -2.01
RPA3-204ENST00000406109 CAMK2N1Q7Z7J9 78 aa2.48□□□□□ -2.01
RPA3-204ENST00000406109 PRR15LQ9BU68 103 aa2.48□□□□□ -2.01
RPA3-204ENST00000406109 SMIM26A0A096LP01 95 aa2.46□□□□□ -2.02
RPA3-204ENST00000406109 KRTAP10-12P60413 245 aa2.45□□□□□ -2.02
RPA3-204ENST00000406109 LINC01558Q9Y6Z2 57 aa2.45□□□□□ -2.02
RPA3-204ENST00000406109 A8MU10 97 aa2.44□□□□□ -2.02
RPA3-204ENST00000406109 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
RPA3-204ENST00000406109 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
RPA3-204ENST00000406109 KRTAP12-1P59990 96 aa2.43□□□□□ -2.02
RPA3-204ENST00000406109 MT3P25713 68 aa2.42□□□□□ -2.02
RPA3-204ENST00000406109 UQCR11O14957 56 aa2.39□□□□□ -2.03
RPA3-204ENST00000406109 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
RPA3-204ENST00000406109 V9GYY9 64 aa2.38□□□□□ -2.03
RPA3-204ENST00000406109 PSPHP1O15172 72 aa2.37□□□□□ -2.03
RPA3-204ENST00000406109 Q1T7F1 81 aa2.36□□□□□ -2.03
RPA3-204ENST00000406109 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
RPA3-204ENST00000406109 MIR22HGQ0VDD5 57 aa2.35□□□□□ -2.03
RPA3-204ENST00000406109 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.03
RPA3-204ENST00000406109 MT4P47944 62 aa2.33□□□□□ -2.04
RPA3-204ENST00000406109 KRTAP19-7Q3SYF9 63 aa2.33□□□□□ -2.04
RPA3-204ENST00000406109 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
RPA3-204ENST00000406109 RPS28P62857 69 aaKnown RBP2.32□□□□□ -2.04
RPA3-204ENST00000406109 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
RPA3-204ENST00000406109 C10orf95Q9H7T3 257 aa2.32□□□□□ -2.04
RPA3-204ENST00000406109 MT1EP04732 61 aa2.31□□□□□ -2.04
RPA3-204ENST00000406109 TNP1P09430 55 aa2.31□□□□□ -2.04
RPA3-204ENST00000406109 K7ERS5 55 aa2.29□□□□□ -2.04
RPA3-204ENST00000406109 A6NED7 52 aa2.28□□□□□ -2.04
RPA3-204ENST00000406109 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
RPA3-204ENST00000406109 KRTAP19-5Q3LI72 72 aa2.26□□□□□ -2.05
RPA3-204ENST00000406109 LCE3AQ5TA76 89 aa2.25□□□□□ -2.05
RPA3-204ENST00000406109 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
RPA3-204ENST00000406109 MT1GP13640 62 aa2.23□□□□□ -2.05
RPA3-204ENST00000406109 MT1MQ8N339 61 aa2.21□□□□□ -2.06
RPA3-204ENST00000406109 KRTAP25-1Q3LHN0 102 aa2.2□□□□□ -2.06
RPA3-204ENST00000406109 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
RPA3-204ENST00000406109 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
RPA3-204ENST00000406109 CDC42SE1Q9NRR8 79 aa2.17□□□□□ -2.06
RPA3-204ENST00000406109 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
RPA3-204ENST00000406109 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
RPA3-204ENST00000406109 MT1LQ93083 61 aa2.16□□□□□ -2.06
RPA3-204ENST00000406109 ROMO1P60602 79 aa2.15□□□□□ -2.07
RPA3-204ENST00000406109 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
RPA3-204ENST00000406109 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
RPA3-204ENST00000406109 LCE3CQ5T5A8 94 aa2.11□□□□□ -2.07
RPA3-204ENST00000406109 SYNE1Q8NF91 8797 aaKnown RBP2.1□□□□□ -2.07
RPA3-204ENST00000406109 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
RPA3-204ENST00000406109 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
RPA3-204ENST00000406109 BRK1Q8WUW1 75 aa2.07□□□□□ -2.08
RPA3-204ENST00000406109 PRAC1Q96KF2 57 aa2.06□□□□□ -2.08
RPA3-204ENST00000406109 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
RPA3-204ENST00000406109 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
RPA3-204ENST00000406109 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
RPA3-204ENST00000406109 PMAIP1Q13794 54 aa1.96□□□□□ -2.1
RPA3-204ENST00000406109 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
RPA3-204ENST00000406109 PRO0628Q9UI54 55 aa1.86□□□□□ -2.11
RPA3-204ENST00000406109 KRTAP6-1Q3LI64 71 aa1.85□□□□□ -2.11
RPA3-204ENST00000406109 MT1AP04731 61 aa1.84□□□□□ -2.11
RPA3-204ENST00000406109 KRTAP6-2Q3LI66 62 aa1.81□□□□□ -2.12
RPA3-204ENST00000406109 KTN1-AS1Q86SY8 53 aa1.75□□□□□ -2.13
RPA3-204ENST00000406109 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
RPA3-204ENST00000406109 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
RPA3-204ENST00000406109 NDUFAF8A1L188 74 aa1.69□□□□□ -2.14
RPA3-204ENST00000406109 LUZP6Q538Z0 58 aa1.56□□□□□ -2.16
RPA3-204ENST00000406109 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
RPA3-204ENST00000406109 LCE3DQ9BYE3 92 aa1.47□□□□□ -2.17
RPA3-204ENST00000406109 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
RPA3-204ENST00000406109 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
RPA3-204ENST00000406109 PRM1P04553 51 aa1.1□□□□□ -2.23
RPA3-204ENST00000406109 INE1O15225 51 aa1.08□□□□□ -2.24
RPA3-204ENST00000406109 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
RPA3-204ENST00000406109 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 88.9 ms