RNA–Protein interactions for RNA: ENST00000400163.6

COL4A2-202, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 5

Gene COL4A2, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-202ENST00000400163 SEC61GP60059 68 aa6.65□□□□□ -1.34
COL4A2-202ENST00000400163 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
COL4A2-202ENST00000400163 A0A0D9SG42 100 aa6.63□□□□□ -1.35
COL4A2-202ENST00000400163 ATP5EP56381 51 aaPredicted RBP6.62□□□□□ -1.35
COL4A2-202ENST00000400163 A0A1B0GU33 70 aa6.61□□□□□ -1.35
COL4A2-202ENST00000400163 KRTAP19-5Q3LI72 72 aa6.6□□□□□ -1.35
COL4A2-202ENST00000400163 TMEM258P61165 79 aa6.59□□□□□ -1.35
COL4A2-202ENST00000400163 MT1MQ8N339 61 aa6.58□□□□□ -1.36
COL4A2-202ENST00000400163 A0A1B0GU69 56 aa6.57□□□□□ -1.36
COL4A2-202ENST00000400163 KRTAP5-4Q6L8H1 288 aa6.57□□□□□ -1.36
COL4A2-202ENST00000400163 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
COL4A2-202ENST00000400163 KRTAP5-7Q6L8G8 165 aa6.51□□□□□ -1.37
COL4A2-202ENST00000400163 A8MU10 97 aa6.5□□□□□ -1.37
COL4A2-202ENST00000400163 SPINT4Q6UDR6 99 aa6.48□□□□□ -1.37
COL4A2-202ENST00000400163 KRTAP12-1P59990 96 aa6.47□□□□□ -1.37
COL4A2-202ENST00000400163 MT1LQ93083 61 aa6.47□□□□□ -1.37
COL4A2-202ENST00000400163 LINC01558Q9Y6Z2 57 aa6.47□□□□□ -1.37
COL4A2-202ENST00000400163 KRTAP4-3Q9BYR4 195 aa6.46□□□□□ -1.38
COL4A2-202ENST00000400163 PCP4P48539 62 aa6.44□□□□□ -1.38
COL4A2-202ENST00000400163 PRR15LQ9BU68 103 aa6.36□□□□□ -1.39
COL4A2-202ENST00000400163 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
COL4A2-202ENST00000400163 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
COL4A2-202ENST00000400163 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
COL4A2-202ENST00000400163 PSPHP1O15172 72 aa6.25□□□□□ -1.41
COL4A2-202ENST00000400163 SPRR5A0A1B0GTR4 108 aa6.24□□□□□ -1.41
COL4A2-202ENST00000400163 KRTAP20-2Q3LI61 65 aa6.24□□□□□ -1.41
COL4A2-202ENST00000400163 TNP1P09430 55 aa6.22□□□□□ -1.41
COL4A2-202ENST00000400163 UQCR11O14957 56 aa6.2□□□□□ -1.42
COL4A2-202ENST00000400163 Q1T7F1 81 aa6.19□□□□□ -1.42
COL4A2-202ENST00000400163 A0A0A0MQY5 61 aa6.16□□□□□ -1.42
COL4A2-202ENST00000400163 MIR22HGQ0VDD5 57 aa6.14□□□□□ -1.43
COL4A2-202ENST00000400163 V9GYY9 64 aa6.11□□□□□ -1.43
COL4A2-202ENST00000400163 KRTAP5-5Q701N2 237 aaPredicted RBP6.08□□□□□ -1.44
COL4A2-202ENST00000400163 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
COL4A2-202ENST00000400163 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
COL4A2-202ENST00000400163 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
COL4A2-202ENST00000400163 A6NED7 52 aa5.97□□□□□ -1.45
COL4A2-202ENST00000400163 SYNE1Q8NF91 8797 aaKnown RBP5.92□□□□□ -1.46
COL4A2-202ENST00000400163 K7ERS5 55 aa5.85□□□□□ -1.47
COL4A2-202ENST00000400163 KRTAP25-1Q3LHN0 102 aa5.75□□□□□ -1.49
COL4A2-202ENST00000400163 CDC42SE1Q9NRR8 79 aa5.72□□□□□ -1.49
COL4A2-202ENST00000400163 AHNAKQ09666 5890 aaKnown RBP5.69□□□□□ -1.5
COL4A2-202ENST00000400163 MUC5ACP98088 5654 aa5.67□□□□□ -1.5
COL4A2-202ENST00000400163 KRTAP5-2Q701N4 177 aa5.66□□□□□ -1.5
COL4A2-202ENST00000400163 KRTAP5-8O75690 187 aa5.65□□□□□ -1.5
COL4A2-202ENST00000400163 ROMO1P60602 79 aa5.61□□□□□ -1.51
COL4A2-202ENST00000400163 MUC5BQ9HC84 5762 aaPredicted RBP5.57□□□□□ -1.52
COL4A2-202ENST00000400163 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
COL4A2-202ENST00000400163 KRTAP6-1Q3LI64 71 aa5.51□□□□□ -1.53
COL4A2-202ENST00000400163 MT1AP04731 61 aa5.5□□□□□ -1.53
COL4A2-202ENST00000400163 BRK1Q8WUW1 75 aa5.42□□□□□ -1.54
COL4A2-202ENST00000400163 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.55
COL4A2-202ENST00000400163 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
COL4A2-202ENST00000400163 PRO0628Q9UI54 55 aa5.21□□□□□ -1.58
COL4A2-202ENST00000400163 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
COL4A2-202ENST00000400163 KRTAP5-1Q6L8H4 278 aa5.18□□□□□ -1.58
COL4A2-202ENST00000400163 MT3P25713 68 aa5.13□□□□□ -1.59
COL4A2-202ENST00000400163 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.12□□□□□ -1.59
COL4A2-202ENST00000400163 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
COL4A2-202ENST00000400163 PMAIP1Q13794 54 aa5.07□□□□□ -1.6
COL4A2-202ENST00000400163 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
COL4A2-202ENST00000400163 KRTAP5-11Q6L8G4 156 aa4.81□□□□□ -1.64
COL4A2-202ENST00000400163 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
COL4A2-202ENST00000400163 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
COL4A2-202ENST00000400163 LCE1FQ5T754 118 aa4.64□□□□□ -1.67
COL4A2-202ENST00000400163 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
COL4A2-202ENST00000400163 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
COL4A2-202ENST00000400163 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
COL4A2-202ENST00000400163 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
COL4A2-202ENST00000400163 PHGR1C9JFL3 82 aa3.93□□□□□ -1.78
COL4A2-202ENST00000400163 LUZP6Q538Z0 58 aa3.93□□□□□ -1.78
COL4A2-202ENST00000400163 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
COL4A2-202ENST00000400163 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
COL4A2-202ENST00000400163 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
COL4A2-202ENST00000400163 INE1O15225 51 aa3.26□□□□□ -1.89
COL4A2-202ENST00000400163 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
COL4A2-202ENST00000400163 PRM1P04553 51 aa2.95□□□□□ -1.94
COL4A2-202ENST00000400163 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 53.1 ms