RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
USP16-204ENST00000399976 KRTAP8-1Q8IUC2 63 aa2.93□□□□□ -1.94
USP16-204ENST00000399976 C10orf95Q9H7T3 257 aa2.93□□□□□ -1.94
USP16-204ENST00000399976 KRTAP23-1A1A580 65 aa2.93□□□□□ -1.94
USP16-204ENST00000399976 TNP1P09430 55 aa2.91□□□□□ -1.94
USP16-204ENST00000399976 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.94
USP16-204ENST00000399976 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
USP16-204ENST00000399976 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
USP16-204ENST00000399976 KRTAP19-4Q3LI73 84 aa2.86□□□□□ -1.95
USP16-204ENST00000399976 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
USP16-204ENST00000399976 SPRR2FQ96RM1 72 aa2.84□□□□□ -1.95
USP16-204ENST00000399976 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
USP16-204ENST00000399976 MT1EP04732 61 aa2.8□□□□□ -1.96
USP16-204ENST00000399976 SPRR2EP22531 72 aa2.79□□□□□ -1.96
USP16-204ENST00000399976 SPRR2BP35325 72 aa2.79□□□□□ -1.96
USP16-204ENST00000399976 SPRR2AP35326 72 aa2.79□□□□□ -1.96
USP16-204ENST00000399976 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
USP16-204ENST00000399976 LCE5AQ5TCM9 118 aa2.76□□□□□ -1.97
USP16-204ENST00000399976 KRTAP19-3Q7Z4W3 81 aa2.76□□□□□ -1.97
USP16-204ENST00000399976 KRTAP2-3P0C7H8 128 aa2.76□□□□□ -1.97
USP16-204ENST00000399976 KRTAP2-4Q9BYR9 128 aa2.76□□□□□ -1.97
USP16-204ENST00000399976 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
USP16-204ENST00000399976 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
USP16-204ENST00000399976 MT1GP13640 62 aa2.74□□□□□ -1.97
USP16-204ENST00000399976 NEBP20929 6669 aa2.74□□□□□ -1.97
USP16-204ENST00000399976 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
USP16-204ENST00000399976 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
USP16-204ENST00000399976 SPRR2DP22532 72 aa2.71□□□□□ -1.98
USP16-204ENST00000399976 MT1LQ93083 61 aa2.71□□□□□ -1.98
USP16-204ENST00000399976 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
USP16-204ENST00000399976 KMT2DO14686 5537 aa2.69□□□□□ -1.98
USP16-204ENST00000399976 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
USP16-204ENST00000399976 KRTAP2-1Q9BYU5 128 aa2.67□□□□□ -1.98
USP16-204ENST00000399976 MT1MQ8N339 61 aa2.65□□□□□ -1.99
USP16-204ENST00000399976 MUC12Q9UKN1 5478 aa2.63□□□□□ -1.99
USP16-204ENST00000399976 LCE4AQ5TA78 99 aa2.61□□□□□ -1.99
USP16-204ENST00000399976 MDN1Q9NU22 5596 aa2.58□□□□□ -2
USP16-204ENST00000399976 LCE3CQ5T5A8 94 aa2.53□□□□□ -2
USP16-204ENST00000399976 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
USP16-204ENST00000399976 INE1O15225 51 aa2.5□□□□□ -2.01
USP16-204ENST00000399976 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
USP16-204ENST00000399976 KRTAP4-3Q9BYR4 195 aa2.43□□□□□ -2.02
USP16-204ENST00000399976 MT1AP04731 61 aa2.35□□□□□ -2.03
USP16-204ENST00000399976 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
USP16-204ENST00000399976 KRTAP9-6A8MVA2 160 aa2.31□□□□□ -2.04
USP16-204ENST00000399976 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
USP16-204ENST00000399976 MT4P47944 62 aa2.26□□□□□ -2.05
USP16-204ENST00000399976 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
USP16-204ENST00000399976 KRTAP6-1Q3LI64 71 aa2.23□□□□□ -2.05
USP16-204ENST00000399976 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
USP16-204ENST00000399976 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
USP16-204ENST00000399976 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
USP16-204ENST00000399976 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
USP16-204ENST00000399976 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
USP16-204ENST00000399976 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
USP16-204ENST00000399976 MT3P25713 68 aa2.13□□□□□ -2.07
USP16-204ENST00000399976 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
USP16-204ENST00000399976 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.08
USP16-204ENST00000399976 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
USP16-204ENST00000399976 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
USP16-204ENST00000399976 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
USP16-204ENST00000399976 LCE1EQ5T753 118 aa2□□□□□ -2.09
USP16-204ENST00000399976 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
USP16-204ENST00000399976 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.12
USP16-204ENST00000399976 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
USP16-204ENST00000399976 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
USP16-204ENST00000399976 LCE3EQ5T5B0 92 aa1.78□□□□□ -2.12
USP16-204ENST00000399976 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
USP16-204ENST00000399976 LCE1FQ5T754 118 aa1.68□□□□□ -2.14
USP16-204ENST00000399976 OBSCNQ5VST9 7968 aa1.68□□□□□ -2.14
USP16-204ENST00000399976 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
USP16-204ENST00000399976 PRM1P04553 51 aa1.65□□□□□ -2.14
USP16-204ENST00000399976 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
USP16-204ENST00000399976 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
USP16-204ENST00000399976 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
USP16-204ENST00000399976 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
USP16-204ENST00000399976 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms