RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 PRR15LQ9BU68 103 aa3.21□□□□□ -1.9
USP16-202ENST00000399973 RPS28P62857 69 aaKnown RBP3.19□□□□□ -1.9
USP16-202ENST00000399973 TMEM258P61165 79 aa3.17□□□□□ -1.9
USP16-202ENST00000399973 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
USP16-202ENST00000399973 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
USP16-202ENST00000399973 KRTAP19-7Q3SYF9 63 aa3.15□□□□□ -1.91
USP16-202ENST00000399973 MT1EP04732 61 aa3.13□□□□□ -1.91
USP16-202ENST00000399973 LINC01558Q9Y6Z2 57 aa3.13□□□□□ -1.91
USP16-202ENST00000399973 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
USP16-202ENST00000399973 PRO0628Q9UI54 55 aa3.12□□□□□ -1.91
USP16-202ENST00000399973 V9GYY9 64 aa3.12□□□□□ -1.91
USP16-202ENST00000399973 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
USP16-202ENST00000399973 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
USP16-202ENST00000399973 TNP1P09430 55 aa3.09□□□□□ -1.91
USP16-202ENST00000399973 UQCR11O14957 56 aa3.08□□□□□ -1.92
USP16-202ENST00000399973 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
USP16-202ENST00000399973 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
USP16-202ENST00000399973 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.92
USP16-202ENST00000399973 PP632Q6XCG6 107 aa3.02□□□□□ -1.93
USP16-202ENST00000399973 PSPHP1O15172 72 aa3.01□□□□□ -1.93
USP16-202ENST00000399973 MT1GP13640 62 aa3.01□□□□□ -1.93
USP16-202ENST00000399973 BRK1Q8WUW1 75 aa3.01□□□□□ -1.93
USP16-202ENST00000399973 DSTQ03001 7570 aaKnown RBP3□□□□□ -1.93
USP16-202ENST00000399973 MT1MQ8N339 61 aa2.99□□□□□ -1.93
USP16-202ENST00000399973 MT1LQ93083 61 aa2.99□□□□□ -1.93
USP16-202ENST00000399973 K7ERS5 55 aa2.98□□□□□ -1.93
USP16-202ENST00000399973 PMAIP1Q13794 54 aa2.97□□□□□ -1.93
USP16-202ENST00000399973 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
USP16-202ENST00000399973 Q1T7F1 81 aa2.94□□□□□ -1.94
USP16-202ENST00000399973 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
USP16-202ENST00000399973 A6NED7 52 aa2.92□□□□□ -1.94
USP16-202ENST00000399973 KRTAP25-1Q3LHN0 102 aa2.92□□□□□ -1.94
USP16-202ENST00000399973 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
USP16-202ENST00000399973 MT4P47944 62 aa2.87□□□□□ -1.95
USP16-202ENST00000399973 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
USP16-202ENST00000399973 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
USP16-202ENST00000399973 KTN1-AS1Q86SY8 53 aa2.85□□□□□ -1.95
USP16-202ENST00000399973 CDC42SE1Q9NRR8 79 aa2.82□□□□□ -1.96
USP16-202ENST00000399973 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
USP16-202ENST00000399973 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
USP16-202ENST00000399973 ROMO1P60602 79 aa2.77□□□□□ -1.97
USP16-202ENST00000399973 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
USP16-202ENST00000399973 PRAC1Q96KF2 57 aa2.76□□□□□ -1.97
USP16-202ENST00000399973 MT3P25713 68 aa2.71□□□□□ -1.98
USP16-202ENST00000399973 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
USP16-202ENST00000399973 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
USP16-202ENST00000399973 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
USP16-202ENST00000399973 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
USP16-202ENST00000399973 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
USP16-202ENST00000399973 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
USP16-202ENST00000399973 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
USP16-202ENST00000399973 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
USP16-202ENST00000399973 SYNE1Q8NF91 8797 aaKnown RBP2.59□□□□□ -1.99
USP16-202ENST00000399973 LCE1FQ5T754 118 aa2.57□□□□□ -2
USP16-202ENST00000399973 MT1AP04731 61 aa2.55□□□□□ -2
USP16-202ENST00000399973 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
USP16-202ENST00000399973 NDUFAF8A1L188 74 aa2.53□□□□□ -2
USP16-202ENST00000399973 KRTAP9-6A8MVA2 160 aa2.53□□□□□ -2
USP16-202ENST00000399973 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
USP16-202ENST00000399973 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
USP16-202ENST00000399973 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
USP16-202ENST00000399973 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
USP16-202ENST00000399973 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
USP16-202ENST00000399973 LUZP6Q538Z0 58 aa2.29□□□□□ -2.04
USP16-202ENST00000399973 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
USP16-202ENST00000399973 MUC5ACP98088 5654 aa2.28□□□□□ -2.05
USP16-202ENST00000399973 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
USP16-202ENST00000399973 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
USP16-202ENST00000399973 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
USP16-202ENST00000399973 INE1O15225 51 aa1.95□□□□□ -2.1
USP16-202ENST00000399973 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
USP16-202ENST00000399973 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
USP16-202ENST00000399973 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
USP16-202ENST00000399973 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
USP16-202ENST00000399973 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
USP16-202ENST00000399973 PRM1P04553 51 aa1.43□□□□□ -2.18
USP16-202ENST00000399973 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
USP16-202ENST00000399973 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 38.2 ms