RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 A8MU10 97 aa5.46□□□□□ -1.54
SMIM11A-203ENST00000399299 KRTAP19-5Q3LI72 72 aa5.43□□□□□ -1.54
SMIM11A-203ENST00000399299 PRR15LQ9BU68 103 aa5.43□□□□□ -1.54
SMIM11A-203ENST00000399299 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
SMIM11A-203ENST00000399299 MT1GP13640 62 aa5.38□□□□□ -1.55
SMIM11A-203ENST00000399299 LINC01558Q9Y6Z2 57 aa5.37□□□□□ -1.55
SMIM11A-203ENST00000399299 C10orf95Q9H7T3 257 aa5.36□□□□□ -1.55
SMIM11A-203ENST00000399299 A0A0A0MQY5 61 aa5.35□□□□□ -1.55
SMIM11A-203ENST00000399299 TNP1P09430 55 aa5.35□□□□□ -1.55
SMIM11A-203ENST00000399299 PP632Q6XCG6 107 aa5.34□□□□□ -1.55
SMIM11A-203ENST00000399299 TMEM258P61165 79 aa5.32□□□□□ -1.56
SMIM11A-203ENST00000399299 LCE3AQ5TA76 89 aa5.31□□□□□ -1.56
SMIM11A-203ENST00000399299 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
SMIM11A-203ENST00000399299 MT1LQ93083 61 aa5.3□□□□□ -1.56
SMIM11A-203ENST00000399299 MT1MQ8N339 61 aa5.28□□□□□ -1.56
SMIM11A-203ENST00000399299 UQCR11O14957 56 aa5.25□□□□□ -1.57
SMIM11A-203ENST00000399299 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
SMIM11A-203ENST00000399299 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
SMIM11A-203ENST00000399299 MIR22HGQ0VDD5 57 aa5.11□□□□□ -1.59
SMIM11A-203ENST00000399299 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
SMIM11A-203ENST00000399299 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
SMIM11A-203ENST00000399299 KRTAP5-4Q6L8H1 288 aa5.06□□□□□ -1.6
SMIM11A-203ENST00000399299 V9GYY9 64 aa5.06□□□□□ -1.6
SMIM11A-203ENST00000399299 K7ERS5 55 aa5.04□□□□□ -1.6
SMIM11A-203ENST00000399299 MT4P47944 62 aa5.04□□□□□ -1.6
SMIM11A-203ENST00000399299 Q1T7F1 81 aa5.01□□□□□ -1.61
SMIM11A-203ENST00000399299 HMCN1Q96RW7 5635 aa5□□□□□ -1.61
SMIM11A-203ENST00000399299 PSPHP1O15172 72 aa4.99□□□□□ -1.61
SMIM11A-203ENST00000399299 GPR98Q8WXG9 6306 aa4.99□□□□□ -1.61
SMIM11A-203ENST00000399299 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
SMIM11A-203ENST00000399299 A6NED7 52 aa4.83□□□□□ -1.64
SMIM11A-203ENST00000399299 KRTAP5-10Q6L8G5 202 aa4.78□□□□□ -1.64
SMIM11A-203ENST00000399299 AHNAK2Q8IVF2 5795 aa4.77□□□□□ -1.65
SMIM11A-203ENST00000399299 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
SMIM11A-203ENST00000399299 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
SMIM11A-203ENST00000399299 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
SMIM11A-203ENST00000399299 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
SMIM11A-203ENST00000399299 RPS28P62857 69 aaKnown RBP4.72□□□□□ -1.65
SMIM11A-203ENST00000399299 LCE3CQ5T5A8 94 aa4.71□□□□□ -1.66
SMIM11A-203ENST00000399299 ROMO1P60602 79 aa4.68□□□□□ -1.66
SMIM11A-203ENST00000399299 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
SMIM11A-203ENST00000399299 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
SMIM11A-203ENST00000399299 MT1AP04731 61 aa4.52□□□□□ -1.69
SMIM11A-203ENST00000399299 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
SMIM11A-203ENST00000399299 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
SMIM11A-203ENST00000399299 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
SMIM11A-203ENST00000399299 PRAC1Q96KF2 57 aa4.4□□□□□ -1.71
SMIM11A-203ENST00000399299 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
SMIM11A-203ENST00000399299 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
SMIM11A-203ENST00000399299 MT3P25713 68 aa4.13□□□□□ -1.75
SMIM11A-203ENST00000399299 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
SMIM11A-203ENST00000399299 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
SMIM11A-203ENST00000399299 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
SMIM11A-203ENST00000399299 KRTAP5-1Q6L8H4 278 aa3.97□□□□□ -1.77
SMIM11A-203ENST00000399299 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
SMIM11A-203ENST00000399299 MUC5BQ9HC84 5762 aaPredicted RBP3.94□□□□□ -1.78
SMIM11A-203ENST00000399299 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
SMIM11A-203ENST00000399299 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
SMIM11A-203ENST00000399299 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
SMIM11A-203ENST00000399299 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
SMIM11A-203ENST00000399299 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
SMIM11A-203ENST00000399299 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
SMIM11A-203ENST00000399299 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
SMIM11A-203ENST00000399299 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
SMIM11A-203ENST00000399299 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
SMIM11A-203ENST00000399299 KTN1-AS1Q86SY8 53 aa3.41□□□□□ -1.86
SMIM11A-203ENST00000399299 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
SMIM11A-203ENST00000399299 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
SMIM11A-203ENST00000399299 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
SMIM11A-203ENST00000399299 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
SMIM11A-203ENST00000399299 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
SMIM11A-203ENST00000399299 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
SMIM11A-203ENST00000399299 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
SMIM11A-203ENST00000399299 PRM1P04553 51 aa2.38□□□□□ -2.03
SMIM11A-203ENST00000399299 INE1O15225 51 aa2.22□□□□□ -2.05
SMIM11A-203ENST00000399299 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
SMIM11A-203ENST00000399299 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 57.2 ms