RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 NEBP20929 6669 aa4.77□□□□□ -1.65
HLA-DQB1-203ENST00000399082 SPRR2FQ96RM1 72 aa4.76□□□□□ -1.65
HLA-DQB1-203ENST00000399082 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
HLA-DQB1-203ENST00000399082 KRTAP5-11Q6L8G4 156 aa4.73□□□□□ -1.65
HLA-DQB1-203ENST00000399082 CDC42SE1Q9NRR8 79 aa4.71□□□□□ -1.66
HLA-DQB1-203ENST00000399082 K7ERS5 55 aa4.7□□□□□ -1.66
HLA-DQB1-203ENST00000399082 TNP1P09430 55 aa4.69□□□□□ -1.66
HLA-DQB1-203ENST00000399082 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
HLA-DQB1-203ENST00000399082 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
HLA-DQB1-203ENST00000399082 SPRR2EP22531 72 aa4.63□□□□□ -1.67
HLA-DQB1-203ENST00000399082 SPRR2BP35325 72 aa4.63□□□□□ -1.67
HLA-DQB1-203ENST00000399082 SPRR2AP35326 72 aa4.63□□□□□ -1.67
HLA-DQB1-203ENST00000399082 MT1EP04732 61 aa4.61□□□□□ -1.67
HLA-DQB1-203ENST00000399082 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
HLA-DQB1-203ENST00000399082 KRTAP25-1Q3LHN0 102 aa4.59□□□□□ -1.67
HLA-DQB1-203ENST00000399082 ROMO1P60602 79 aa4.51□□□□□ -1.69
HLA-DQB1-203ENST00000399082 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
HLA-DQB1-203ENST00000399082 BRK1Q8WUW1 75 aa4.48□□□□□ -1.69
HLA-DQB1-203ENST00000399082 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
HLA-DQB1-203ENST00000399082 SPRR2DP22532 72 aa4.46□□□□□ -1.7
HLA-DQB1-203ENST00000399082 MT1LQ93083 61 aa4.46□□□□□ -1.7
HLA-DQB1-203ENST00000399082 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
HLA-DQB1-203ENST00000399082 KRTAP20-1Q3LI63 56 aa4.43□□□□□ -1.7
HLA-DQB1-203ENST00000399082 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
HLA-DQB1-203ENST00000399082 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
HLA-DQB1-203ENST00000399082 MT1GP13640 62 aa4.39□□□□□ -1.71
HLA-DQB1-203ENST00000399082 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
HLA-DQB1-203ENST00000399082 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
HLA-DQB1-203ENST00000399082 MT1MQ8N339 61 aa4.36□□□□□ -1.71
HLA-DQB1-203ENST00000399082 DSTQ03001 7570 aaKnown RBP4.33□□□□□ -1.72
HLA-DQB1-203ENST00000399082 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
HLA-DQB1-203ENST00000399082 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
HLA-DQB1-203ENST00000399082 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
HLA-DQB1-203ENST00000399082 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
HLA-DQB1-203ENST00000399082 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
HLA-DQB1-203ENST00000399082 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
HLA-DQB1-203ENST00000399082 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
HLA-DQB1-203ENST00000399082 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
HLA-DQB1-203ENST00000399082 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
HLA-DQB1-203ENST00000399082 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
HLA-DQB1-203ENST00000399082 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
HLA-DQB1-203ENST00000399082 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
HLA-DQB1-203ENST00000399082 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
HLA-DQB1-203ENST00000399082 MT4P47944 62 aa3.89□□□□□ -1.79
HLA-DQB1-203ENST00000399082 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
HLA-DQB1-203ENST00000399082 MT3P25713 68 aa3.81□□□□□ -1.8
HLA-DQB1-203ENST00000399082 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
HLA-DQB1-203ENST00000399082 MT1AP04731 61 aa3.78□□□□□ -1.8
HLA-DQB1-203ENST00000399082 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
HLA-DQB1-203ENST00000399082 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
HLA-DQB1-203ENST00000399082 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
HLA-DQB1-203ENST00000399082 KRTAP12-4P60329 112 aa3.72□□□□□ -1.81
HLA-DQB1-203ENST00000399082 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
HLA-DQB1-203ENST00000399082 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.83
HLA-DQB1-203ENST00000399082 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
HLA-DQB1-203ENST00000399082 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
HLA-DQB1-203ENST00000399082 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
HLA-DQB1-203ENST00000399082 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
HLA-DQB1-203ENST00000399082 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
HLA-DQB1-203ENST00000399082 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
HLA-DQB1-203ENST00000399082 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
HLA-DQB1-203ENST00000399082 LUZP6Q538Z0 58 aa3.26□□□□□ -1.89
HLA-DQB1-203ENST00000399082 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
HLA-DQB1-203ENST00000399082 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
HLA-DQB1-203ENST00000399082 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
HLA-DQB1-203ENST00000399082 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
HLA-DQB1-203ENST00000399082 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
HLA-DQB1-203ENST00000399082 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
HLA-DQB1-203ENST00000399082 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
HLA-DQB1-203ENST00000399082 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
HLA-DQB1-203ENST00000399082 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
HLA-DQB1-203ENST00000399082 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
HLA-DQB1-203ENST00000399082 INE1O15225 51 aa2.38□□□□□ -2.03
HLA-DQB1-203ENST00000399082 PRM1P04553 51 aa2.35□□□□□ -2.03
HLA-DQB1-203ENST00000399082 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
HLA-DQB1-203ENST00000399082 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
HLA-DQB1-203ENST00000399082 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 61.7 ms