RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 KRTAP2-2Q9BYT5 123 aa6.99□□□□□ -1.29
COLCA2-201ENST00000398035 KRTAP2-1Q9BYU5 128 aa6.99□□□□□ -1.29
COLCA2-201ENST00000398035 MT1EP04732 61 aa6.97□□□□□ -1.29
COLCA2-201ENST00000398035 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
COLCA2-201ENST00000398035 LCE3BQ5TA77 95 aa6.9□□□□□ -1.31
COLCA2-201ENST00000398035 KRTAP19-3Q7Z4W3 81 aa6.9□□□□□ -1.31
COLCA2-201ENST00000398035 LCE5AQ5TCM9 118 aa6.89□□□□□ -1.31
COLCA2-201ENST00000398035 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
COLCA2-201ENST00000398035 MT1GP13640 62 aa6.81□□□□□ -1.32
COLCA2-201ENST00000398035 KRTAP25-1Q3LHN0 102 aa6.78□□□□□ -1.32
COLCA2-201ENST00000398035 PP632Q6XCG6 107 aa6.78□□□□□ -1.32
COLCA2-201ENST00000398035 ROMO1P60602 79 aa6.75□□□□□ -1.33
COLCA2-201ENST00000398035 MT1LQ93083 61 aa6.69□□□□□ -1.34
COLCA2-201ENST00000398035 KRTAP12-3P60328 96 aa6.65□□□□□ -1.35
COLCA2-201ENST00000398035 MT1MQ8N339 61 aa6.61□□□□□ -1.35
COLCA2-201ENST00000398035 DSTQ03001 7570 aaKnown RBP6.58□□□□□ -1.36
COLCA2-201ENST00000398035 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
COLCA2-201ENST00000398035 KRTAP19-4Q3LI73 84 aa6.44□□□□□ -1.38
COLCA2-201ENST00000398035 LOC100996750A0A140TA64 210 aa6.39□□□□□ -1.39
COLCA2-201ENST00000398035 KRTAP4-6Q9BYQ5 205 aa6.39□□□□□ -1.39
COLCA2-201ENST00000398035 KRTAP4-3Q9BYR4 195 aa6.39□□□□□ -1.39
COLCA2-201ENST00000398035 LCE4AQ5TA78 99 aa6.34□□□□□ -1.39
COLCA2-201ENST00000398035 KRTAP4-9Q9BYQ8 210 aa6.32□□□□□ -1.4
COLCA2-201ENST00000398035 KRTAP4-7Q9BYR0 210 aa6.32□□□□□ -1.4
COLCA2-201ENST00000398035 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
COLCA2-201ENST00000398035 KRTAP5-4Q6L8H1 288 aa6.22□□□□□ -1.41
COLCA2-201ENST00000398035 LCE1DQ5T752 114 aa6.21□□□□□ -1.42
COLCA2-201ENST00000398035 MT4P47944 62 aa6.16□□□□□ -1.42
COLCA2-201ENST00000398035 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
COLCA2-201ENST00000398035 H3BS24 57 aa6.1□□□□□ -1.43
COLCA2-201ENST00000398035 HMCN1Q96RW7 5635 aa6.05□□□□□ -1.44
COLCA2-201ENST00000398035 KRTAP5-5Q701N2 237 aaPredicted RBP6.05□□□□□ -1.44
COLCA2-201ENST00000398035 GPR98Q8WXG9 6306 aa5.94□□□□□ -1.46
COLCA2-201ENST00000398035 KRTAP12-4P60329 112 aa5.94□□□□□ -1.46
COLCA2-201ENST00000398035 SPRR5A0A1B0GTR4 108 aa5.91□□□□□ -1.46
COLCA2-201ENST00000398035 NDUFAF8A1L188 74 aa5.89□□□□□ -1.47
COLCA2-201ENST00000398035 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
COLCA2-201ENST00000398035 MT1AP04731 61 aa5.72□□□□□ -1.49
COLCA2-201ENST00000398035 LUZP6Q538Z0 58 aa5.71□□□□□ -1.5
COLCA2-201ENST00000398035 KRTAP9-6A8MVA2 160 aa5.7□□□□□ -1.5
COLCA2-201ENST00000398035 AHNAK2Q8IVF2 5795 aa5.7□□□□□ -1.5
COLCA2-201ENST00000398035 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
COLCA2-201ENST00000398035 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
COLCA2-201ENST00000398035 KRTAP4-12Q9BQ66 201 aa5.66□□□□□ -1.5
COLCA2-201ENST00000398035 KRTAP5-3Q6L8H2 238 aa5.65□□□□□ -1.5
COLCA2-201ENST00000398035 KRTAP6-1Q3LI64 71 aa5.63□□□□□ -1.51
COLCA2-201ENST00000398035 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
COLCA2-201ENST00000398035 KRTAP9-9Q9BYP9 154 aa5.51□□□□□ -1.53
COLCA2-201ENST00000398035 KRTAP5-2Q701N4 177 aa5.47□□□□□ -1.53
COLCA2-201ENST00000398035 KRTAP5-7Q6L8G8 165 aa5.45□□□□□ -1.54
COLCA2-201ENST00000398035 A0A0A0MQY5 61 aa5.41□□□□□ -1.54
COLCA2-201ENST00000398035 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
COLCA2-201ENST00000398035 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
COLCA2-201ENST00000398035 MT3P25713 68 aa5.28□□□□□ -1.56
COLCA2-201ENST00000398035 KRTAP5-8O75690 187 aa5.1□□□□□ -1.59
COLCA2-201ENST00000398035 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
COLCA2-201ENST00000398035 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
COLCA2-201ENST00000398035 INE1O15225 51 aa4.97□□□□□ -1.61
COLCA2-201ENST00000398035 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
COLCA2-201ENST00000398035 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
COLCA2-201ENST00000398035 MUC5BQ9HC84 5762 aaPredicted RBP4.73□□□□□ -1.65
COLCA2-201ENST00000398035 MUC5ACP98088 5654 aa4.71□□□□□ -1.66
COLCA2-201ENST00000398035 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
COLCA2-201ENST00000398035 LCE3DQ9BYE3 92 aa4.49□□□□□ -1.69
COLCA2-201ENST00000398035 LCE1CQ5T751 118 aa4.46□□□□□ -1.7
COLCA2-201ENST00000398035 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
COLCA2-201ENST00000398035 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
COLCA2-201ENST00000398035 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
COLCA2-201ENST00000398035 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
COLCA2-201ENST00000398035 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
COLCA2-201ENST00000398035 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
COLCA2-201ENST00000398035 PRM1P04553 51 aa3.53□□□□□ -1.85
COLCA2-201ENST00000398035 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
COLCA2-201ENST00000398035 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
COLCA2-201ENST00000398035 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
COLCA2-201ENST00000398035 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
COLCA2-201ENST00000398035 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 143 ms