RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 MIR22HGQ0VDD5 57 aa5.27□□□□□ -1.57
SNRNP25-203ENST00000397876 SPATA8Q6RVD6 105 aa5.27□□□□□ -1.57
SNRNP25-203ENST00000397876 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
SNRNP25-203ENST00000397876 SPINT4Q6UDR6 99 aa5.22□□□□□ -1.57
SNRNP25-203ENST00000397876 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
SNRNP25-203ENST00000397876 MT1GP13640 62 aa5.18□□□□□ -1.58
SNRNP25-203ENST00000397876 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
SNRNP25-203ENST00000397876 A0A1B0GU33 70 aa5.17□□□□□ -1.58
SNRNP25-203ENST00000397876 KRTAP12-1P59990 96 aa5.14□□□□□ -1.59
SNRNP25-203ENST00000397876 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
SNRNP25-203ENST00000397876 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
SNRNP25-203ENST00000397876 MT1MQ8N339 61 aa5.1□□□□□ -1.59
SNRNP25-203ENST00000397876 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.59
SNRNP25-203ENST00000397876 MT4P47944 62 aa5.07□□□□□ -1.6
SNRNP25-203ENST00000397876 MT1LQ93083 61 aa5.07□□□□□ -1.6
SNRNP25-203ENST00000397876 K7ERS5 55 aa5.05□□□□□ -1.6
SNRNP25-203ENST00000397876 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
SNRNP25-203ENST00000397876 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
SNRNP25-203ENST00000397876 C10orf95Q9H7T3 257 aa4.99□□□□□ -1.61
SNRNP25-203ENST00000397876 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
SNRNP25-203ENST00000397876 TNP1P09430 55 aa4.98□□□□□ -1.61
SNRNP25-203ENST00000397876 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
SNRNP25-203ENST00000397876 KRTAP5-4Q6L8H1 288 aa4.95□□□□□ -1.62
SNRNP25-203ENST00000397876 KRTAP4-6Q9BYQ5 205 aa4.88□□□□□ -1.63
SNRNP25-203ENST00000397876 KRTAP5-10Q6L8G5 202 aa4.86□□□□□ -1.63
SNRNP25-203ENST00000397876 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
SNRNP25-203ENST00000397876 ROMO1P60602 79 aa4.83□□□□□ -1.64
SNRNP25-203ENST00000397876 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
SNRNP25-203ENST00000397876 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
SNRNP25-203ENST00000397876 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
SNRNP25-203ENST00000397876 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
SNRNP25-203ENST00000397876 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
SNRNP25-203ENST00000397876 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
SNRNP25-203ENST00000397876 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
SNRNP25-203ENST00000397876 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
SNRNP25-203ENST00000397876 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
SNRNP25-203ENST00000397876 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
SNRNP25-203ENST00000397876 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
SNRNP25-203ENST00000397876 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
SNRNP25-203ENST00000397876 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
SNRNP25-203ENST00000397876 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
SNRNP25-203ENST00000397876 H3BS24 57 aa4.33□□□□□ -1.72
SNRNP25-203ENST00000397876 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
SNRNP25-203ENST00000397876 MT1AP04731 61 aa4.32□□□□□ -1.72
SNRNP25-203ENST00000397876 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
SNRNP25-203ENST00000397876 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
SNRNP25-203ENST00000397876 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
SNRNP25-203ENST00000397876 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
SNRNP25-203ENST00000397876 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
SNRNP25-203ENST00000397876 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
SNRNP25-203ENST00000397876 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
SNRNP25-203ENST00000397876 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
SNRNP25-203ENST00000397876 MUC5BQ9HC84 5762 aaPredicted RBP4.13□□□□□ -1.75
SNRNP25-203ENST00000397876 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
SNRNP25-203ENST00000397876 LUZP6Q538Z0 58 aa4.1□□□□□ -1.75
SNRNP25-203ENST00000397876 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
SNRNP25-203ENST00000397876 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
SNRNP25-203ENST00000397876 MT3P25713 68 aa3.96□□□□□ -1.78
SNRNP25-203ENST00000397876 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
SNRNP25-203ENST00000397876 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
SNRNP25-203ENST00000397876 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
SNRNP25-203ENST00000397876 INE1O15225 51 aa3.52□□□□□ -1.85
SNRNP25-203ENST00000397876 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
SNRNP25-203ENST00000397876 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
SNRNP25-203ENST00000397876 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
SNRNP25-203ENST00000397876 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
SNRNP25-203ENST00000397876 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
SNRNP25-203ENST00000397876 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
SNRNP25-203ENST00000397876 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
SNRNP25-203ENST00000397876 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
SNRNP25-203ENST00000397876 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
SNRNP25-203ENST00000397876 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
SNRNP25-203ENST00000397876 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
SNRNP25-203ENST00000397876 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
SNRNP25-203ENST00000397876 PRM1P04553 51 aa2.54□□□□□ -2
SNRNP25-203ENST00000397876 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
SNRNP25-203ENST00000397876 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
SNRNP25-203ENST00000397876 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 125.4 ms